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2026
DNA in Health, Identity, and Ancestry
2025
Vineyard mycobiota shows a local and long-term response to the organic mulches application
Agriculture, Ecosystems & Environment
2025
Survey of a grapevine microbiome through functional metagenomics
Food Research International
2025
Characterization of antibiotic resistance genes in soils from agroecosystems of the Brazilian Amazon
Frontiers in Microbiology
2025
Metagenomics
2025
Fungal Functional Level to Describe Soil Fungal Composition at Mediterranean Vineyards
Microbiology Research
2025
Functional Potential and Network-Based Insights into the Rhizosphere Microbiomes of Quercus mongolica and Larix kaempferi Stands
Forests
2025
Vineyard maturity increases arbuscular mycorrhizal and decreases plant pathogen fungal relative abundance in bulk soil across a 1,000 km Chilean gradient
PLANTS, PEOPLE, PLANET
2025
Cross-climatic comparison of microbial stress-responsive genes in urban parks: A comparative analysis
Urban Forestry & Urban Greening
2025
The microbial terroir of Agiorgitiko cv. in the Nemea PDO zone
International Journal of Food Microbiology
2025
What fire didn’t take away: plant growth-promoting microorganisms in burned soils of old-growth Nothofagus forests in Los Andes Cordillera
Plant and Soil
2025
Plant Cell Biology
2024
Organic mulches in grapevine shape bacterial communities in specific vintage and location
Applied Soil Ecology
2024
Vineyard reclamation alters soil properties and microbial community in desertified land
CATENA
2024
Freezing/thawing pretreatment for enhanced energy and resource recovery from waste activated sludge: A critical review
Journal of Cleaner Production
2024
Nematodes alter the taxonomic and functional profiles of benthic bacterial communities: A metatranscriptomic approach
Molecular Ecology
2024
Taxonomic variation, plastic degradation, and antibiotic resistance traits of plastisphere communities in the maturation pond of a wastewater treatment plant
Applied and Environmental Microbiology
2024
Effects of Vineyard Agro-management Practices on Soil Bacterial Community Composition, and Diversity
Microbial Ecology
2024
Detection of Bacterial Diversity of Various Habitats in Çorum Province and Its Criminalistics Contribution to Possible Crime Scene Studies
Black Sea Journal of Engineering and Science
2024
Soil Microbial Communities and Wine Terroir: Research Gaps and Data Needs
Foods
2024
Agricultural Managements Influence the Diversity of Arbuscular Mycorrhizal Fungi in Vineyards from Chilean Mediterranean Climate Ecosystems
Journal of Soil Science and Plant Nutrition
2024
Microbiome dynamics of soils covered by plastic and bioplastic mulches
Biology and Fertility of Soils
2024
Estimating taxonomic and functional structure along a tropical estuary: linking metabolic traits and aspects of ecosystem functioning
Microbiology Spectrum
2023
Penaeus vannamei challenged with a Vibrio parahaemolyticus AHPND strain shows hepatopancreatic microbiota imbalance
Ciencias Marinas
2023
Ecosystem services of Chilean sclerophyllous forests and shrublands on the verge of collapse: A review
Journal of Arid Environments
2023
Evaluation of a Red Grape Marc Extract as a Natural Nitrification Inhibitor and its Effect on Soil Bacterial Community
Journal of Soil Science and Plant Nutrition
2023
Differential response of the soil nutrients, soil bacterial community structure and metabolic functions to different risk areas in Lead-Zine tailings
Frontiers in Microbiology
2023
Recent Advances in Metagenomic Approaches, Applications, and Challenges
Current Microbiology
2023
The soil microbiome: An essential, but neglected, component of regenerative agroecosystems
iScience
2023
Land use modification causes slow, but predictable, change in soil microbial community composition and functional potential
Environmental Microbiome
2023
Spatial and Seasonal Structure of Bacterial Communities Within Alpine Vineyards: Trentino as a Case Study
Microbial Ecology
2023
The Microbial Terroir of the Nemea Zone Agiorgitiko cv.: A First Metataxonomic Approach
Australian Journal of Grape and Wine Research
2023
Innovative Soil, Water and Plant Management Promoting Sustainable Agriculture and Environments :A Review
IOP Conference Series: Earth and Environmental Science
2023
Deciphering the biodesulfurization pathway employing marine mangrove Bacillus aryabhattai strain NM1-A2 according to whole genome sequencing and transcriptome analyses
Genomics
2023
Metatranscriptomic insight into the possible role of clay microbiome in skin disease management
International Journal of Biometeorology
2023
Environmental Contamination Remediation and Management
2023
In Situ Discrimination and Cultivation of Active Degraders in Soils by Genome-Directed Cultivation Assisted by SIP-Raman-Activated Cell Sorting
Environmental Science & Technology
2023
Effects of nitrogen deposition on carbon and nutrient cycling along a natural soil acidity gradient as revealed by metagenomics
New Phytologist
2022
A 16S rRNA amplicon approach to the structural and functional diversity of bacterial communities associated with horse gram crop for drought mitigation and sustainable productivity
Journal of Applied Microbiology
2022
Seasonal Variation Imparts the Shift in Endophytic Bacterial Community Between Mango and its Hemiparasites
Current Microbiology
2022
Impacts of soybean agriculture on the resistome of the Amazonian soil
Frontiers in Microbiology
2022
Soil bacterial communities of three types of plants from ecological restoration areas and plant-growth promotional benefits of Microbacterium invictum (strain X-18)
Frontiers in Microbiology
2022
Identifying the Active Phenanthrene Degraders and Characterizing Their Metabolic Activities at the Single-Cell Level by the Combination of Magnetic-Nanoparticle-Mediated Isolation, Stable-Isotope Probing, and Raman-Activated Cell Sorting (MMI–SIP–RACS)
Environmental Science & Technology
2022
A global microbiome survey of vineyard soils highlights the microbial dimension of viticultural terroirs
Communications Biology
2022
Tree Cover Species Modify the Diversity of Rhizosphere-Associated Microorganisms in Nothofagus obliqua (Mirb.) Oerst Temperate Forests in South-Central Chile
Forests
2022
Microbial Genes of Agricultural Importance in Maize Rhizosphere Unveiled Through Shotgun Metagenomics
Spanish Journal of Soil Science
2022
Lignans Extract from Knotwood of Norway Spruce—A Possible New Weapon against GTDs
Journal of Fungi
2022
Functional diversity of bacterial communities in the rhizosphere of maize grown on a soil under organic and inorganic fertilization
Scientific African
2022
The Grapevine Microbiome to the Rescue: Implications for the Biocontrol of Trunk Diseases
Plants
2022
Decoding the microbiome and metabolome of the Panchagavya—An indigenous fermented bio‐formulation
iMeta
2022
Microplastics contamination in soil affects growth and root nodulation of fenugreek (Trigonella foenum‐graecum L.) and 16 s rRNA sequencing of rhizosphere soil
Journal of Hazardous Materials Advances
2022
Diversity of soil fungi in the vineyards of Changli region in China
Canadian Journal of Microbiology
2022
Advances in Ecological Research
2022
Metagenomics Shows That Termite Activities Influence the Diversity and Composition of Soil Invertebrates in Termite Mound Soils
Applied and Environmental Soil Science
2022
Exclusion of Overabundant White-tailed Deer (Odocoileus virginianus) Results in Shifts in Soil Microbial Communities and Abiotic Soil Condition in a Northeastern Deciduous Forest
The American Midland Naturalist
2022
Advanced research tools for fungal diversity and its impact on forest ecosystem
Environmental Science and Pollution Research
2022
Role of forest site type in determining bacterial and biochemical properties of soil
Ecological Indicators
2021
Comparative Metagenomic and Metabolomic Profiling of Rhizospheres of Panax notoginseng Grown under Forest and Field Conditions
Agronomy
2021
Arsenic speciation, the abundance of arsenite-oxidizing bacteria and microbial community structures in groundwater, surface water, and soil from a gold mine
Journal of Environmental Science and Health, Part A
2021
Environmental and Agricultural Microbiology
2021
Temporal dynamics of total and active prokaryotic communities in two Mediterranean orchard soils treated with solid anaerobic digestate or managed under no-tillage
Biology and Fertility of Soils
2021
Metagenomic Study of the Community Structure and Functional Potentials in Maize Rhizosphere Microbiome: Elucidation of Mechanisms behind the Improvement in Plants under Normal and Stress Conditions
Sustainability
2021
The Influence of Organic Fertilizers on the Abundance of Soil Microorganism Communities, Agrochemical Indicators, and Yield in East Lithuanian Light Soils
Plants
2021
Impact of Soil-Applied Microbial Inoculant and Fertilizer on Fungal and Bacterial Communities in the Rhizosphere of Robinia sp. and Populus sp. Plantations
Forests
2021
The Role of the Adjacent Habitat on Promoting Bat Activity in Vineyards: A Case Study from Central Chile
Acta Chiropterologica
2021
Soil Organic Matter, Soil Structure, and Bacterial Community Structure in a Post-Agricultural Landscape
Frontiers in Earth Science
2021
Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
Frontiers in Microbiology
2021
Forest conversion alters the structure and functional processes of tropical forest soil microbial communities
Land Degradation & Development
2021
Land-use change from cropland to plantations affects the abundance of nitrogen cycle-related microorganisms and genes in the Loess Plateau of China
Applied Soil Ecology
2021
Impact of cropping systems on the functional diversity of rhizosphere microbial communities associated with maize plant: a shotgun approach
Archives of Microbiology
2021
Soil Biology
2021
Unveiling metabolic characteristics of an uncultured Gammaproteobacterium responsible for in situ PAH biodegradation in petroleum polluted soil
Environmental Microbiology
2021
Drought Influences Fungal Community Dynamics in the Grapevine Rhizosphere and Root Microbiome
Journal of Fungi
2021
Biopedturbation by Termites Affects Respiration Profiles of Microbial Communities from Termite Mound Soils
Journal of Soil Science and Plant Nutrition
2021
Functional diversity of microbial communities in two contrasting maize rhizosphere soils
Rhizosphere
2021
Short-Term Effect in Soil Microbial Community of Two Strategies of Recovering Degraded Area in Brazilian Savanna: A Pilot Case Study
Frontiers in Microbiology
2021
Shotgun metagenomics reveals the functional diversity of root-associated endophytic microbiomes in maize plant
Current Plant Biology
2020
Soil microbial diversity drops with land‐use change in a high mountain temperate forest: a metagenomics survey
Environmental Microbiology Reports
2020
Metagenomic analysis reveals the effects of cotton straw–derived biochar on soil nitrogen transformation in drip-irrigated cotton field
Environmental Science and Pollution Research
2020
Rhizomicrobiomics of Caesalpinia bonducella, a wonder plant for PCOS treatment
Physiology and Molecular Biology of Plants
2020
Discovering the indigenous microbial communities associated with the natural fermentation of sap from the cider gum Eucalyptus gunnii
Scientific Reports
2020
A secure cloud-edges computing architecture for metagenomics analysis
Future Generation Computer Systems
2020
Soil Health Restoration and Management
2020
Environmental and Microbial Biotechnology
2020
Highly diverse root endophyte bacterial community is driven by growth substrate and is plant genotype-independent in common bean (Phaseolus vulgaris L.)
PeerJ
2020
Identifying potential threats to soil biodiversity
PeerJ
2020
From pine to pasture: land use history has long-term impacts on soil bacterial community composition and functional potential
FEMS Microbiology Ecology
2020
Temporal variation in soil bacterial communities can be confounded with spatial variation
FEMS Microbiology Ecology
2020
Metagenomic profiling of bacterial diversity and community structure in termite mounds and surrounding soils
Archives of Microbiology
2020
Rhizosphere Biology
2020
The preceding root system drives the composition and function of the rhizosphere microbiome
Genome Biology
2020
Termite Societies Promote the Taxonomic and Functional Diversity of Archaeal Communities in Mound Soils
Biology
2020
Metagenomic analysis reveals mechanisms of atrazine biodegradation promoted by tree species
Environmental Pollution
2020
A common mechanism for efficient N2O reduction in diverse isolates of nodule‐forming bradyrhizobia
Environmental Microbiology
2020
A meta-analysis of the ecotoxicological impact of viticultural practices on soil biodiversity
Environmental Chemistry Letters
2020
Fog Computing
2020
Bacterial community characterization of the rhizobiome of plants belonging to Solanaceae family cultivated in desert soils
Annals of Microbiology
2020
Metagenomic analysis of microbial community and function reveals the response of soil respiration to the conversion of cropland to plantations in the Loess Plateau of China
Global Ecology and Conservation
2019
Soil-plant compartments affect fungal microbiome diversity and composition in grapevine
Fungal Ecology
2019
Soil and Crop Management Strategies to Ensure Higher Crop Productivity within Sustainable Environments
Sustainability
2019
The First Report of Indigenous Free-Living Diazotroph Kosakonia sacchari Isolated from Himalayan Alder-Based Shifting Cultivation System in Nagaland, India
Journal of Soil Science and Plant Nutrition
2019
Soil Biology
2019
Seasonal dynamics of microbial diversity in the rhizosphere of Ulmus pumila L. var. sabulosa in a steppe desert area of Northern China
PeerJ
2019
Changes in soil taxonomic and functional diversity resulting from gamma irradiation
Scientific Reports
2019
Profiling the Functional Diversity of Termite Mound Soil Bacteria as Revealed by Shotgun Sequencing
Genes
2019
Vineyard Soil Microbiome Composition Related to Rotundone Concentration in Australian Cool Climate ‘Peppery’ Shiraz Grapes
Frontiers in Microbiology
2019
Combining Edge and Cloud computing for low-power, cost-effective metagenomics analysis
Future Generation Computer Systems
2019
Characterizing the Intra-Vineyard Variation of Soil Bacterial and Fungal Communities
Frontiers in Microbiology
2019
Shared and unique features of bacterial communities in native forest and vineyard phyllosphere
Ecology and Evolution
2019
Analysis of the bacterial communities and endosymbionts of natural populations of Bemisia tabaci in several crop fields from Mexico semi-arid zone
Annals of Microbiology
2019
The Fungal and Bacterial Rhizosphere Microbiome Associated With Grapevine Rootstock Genotypes in Mature and Young Vineyards
Frontiers in Microbiology
2019
Diversity and Functional Potential of Soil Bacterial Communities in Different Types of Farmland Shelterbelts in Mid-Western Heilongjiang, China
Forests
2019
Plant Cell Biology
2018
Comparative Metagenomic Analysis of Rhizosphere Microbial Community Composition and Functional Potentials under Rehmannia glutinosa Consecutive Monoculture
International Journal of Molecular Sciences
2018
Taxonomic diversity of bacteria from mangrove sediments of Goa: metagenomic and functional analysis
3 Biotech
2018
Fungal Biodiversity and Their Role in Soil Health
Frontiers in Microbiology
2018
Phylogenetic diversity and metabolic potential of microbiome of natural healing clay from Chamliyal (J&K)
Archives of Microbiology
2018
Short-term effect of Eucalyptus plantations on soil microbial communities and soil-atmosphere methane and nitrous oxide exchange
Scientific Reports
2018
Metatranscriptome Analysis Deciphers Multifunctional Genes and Enzymes Linked With the Degradation of Aromatic Compounds and Pesticides in the Wheat Rhizosphere
Frontiers in Microbiology
2018
Low-power portable devices for metagenomics analysis: Fog computing makes bioinformatics ready for the Internet of Things
Future Generation Computer Systems
2018
Comparative mangrove metagenome reveals global prevalence of heavy metals and antibiotic resistome across different ecosystems
Scientific Reports
2018
Evaluating biodiversity workshops in Chile: are farmers responding with conservation action?
Environmental Education Research
2018
Potential for manganese biofouling in water transmission lines using model reactors
Environmental Science: Water Research & Technology
2017
The Rhizosphere Bacterial Microbiota of Vitis vinifera cv. Pinot Noir in an Integrated Pest Management Vineyard
Frontiers in Microbiology
2017
Relations among epiphytic microbial communities from soil, leaves and grapes of the grapevine
Frontiers in Life Science
2017
MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle
GigaScience
2017
Soil biota in vineyards are more influenced by plants and soil quality than by tillage intensity or the surrounding landscape
Scientific Reports
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