Citation sources

Updated weekly. Details via Crossref
Crossref Scopus Google Scholar
136 106 Search
2025
Metabarcoding of a mock community of soil invertebrates: DNA extraction, false positives, and data filtration
Pedobiologia
2025
eDNA uncovers hidden fish diversity in the coral reef ecosystems of Karimunjawa National Park, Indonesia
Regional Studies in Marine Science
2025
Development of PCR Blocking Primers Enabling DNA Metabarcoding Analysis of Dietary Composition in Hematophagous Sea Lamprey
Ecology and Evolution
2025
Adaptation of methane-oxidizing bacteria to environmental changes: implications for coastal methane dynamics
Biogeosciences
2025
‘It's not much, but it's honest work’: The status of environmental DNA analyses of fish biodiversity in southern Africa
Journal of Fish Biology
2025
Rapid DNA/eDNA‐Based ID Tools for Improved Chondrichthyan Monitoring and Management
Molecular Ecology Resources
2025
Dietary Differentiation Between Sympatric Ecotypes of Astatotilapia calliptera From Lake Masoko (Kisiba), Tanzania Revealed by Metabarcoding
Environmental DNA
2025
Exploiting taxonomic information from metagenomes to infer bacterial bioindicators and environmental quality at salmon aquaculture installations
Marine Pollution Bulletin
2025
Prey selection by Chordeiles minor (Common Nighthawk) does not reflect differences in prey availability between breeding and nonbreeding grounds
Ornithology
2025
Habitat conditions of reef-forming corals directly affect the spatial distribution and stability in fish and macroinvertebrate communities: A case study of Mischief Reef
Ecological Informatics
2025
Metabarcoding Analysis of Arthropod Pollinator Diversity: A Methodological Comparison of eDNA Derived From Flowers and DNA Derived From Bulk Samples of Insects
Molecular Ecology
2024
Disentangling omnivory of heteropteran and coccinellid predators present in peach and alfalfa crops by metabarcoding analysis
Biological Control
2024
Brute force prey metabarcoding to explore the diets of small invertebrates
Ecology and Evolution
2024
Modular, multi‐barcode amplicon sequencing for improved species‐level detection of fungal phytopathogens: A case study of pipeline establishment targeting the Ophiostomatales
Environmental DNA
2024
A comparison of two gene regions for assessing community composition of eukaryotic marine microalgae from coastal ecosystems
Scientific Reports
2024
Metabarcoding mosquitoes: MinION sequencing of bulk samples gives accurate species profiles for vector surveillance (Culicidae)
Frontiers in Tropical Diseases
2024
Streamlining large-scale oceanic biomonitoring using passive eDNA samplers integrated into vessel's continuous pump underway seawater systems
Science of The Total Environment
2023
Genetic Markers for Metabarcoding of Freshwater Microalgae: Review
Biology
2023
Toward eDNA‐based bioassessment of freshwater reservoirs with small volumes of water: Robust molecular protocols
Environmental DNA
2023
Selecting the best: Interspecific and age-related diet differences among sympatric steppe passerines
Avian Research
2023
Maximising signal-to-noise ratios in environmental DNA-based monitoring
Science of The Total Environment
2023
Signal and noise in metabarcoding data
PLOS ONE
2023
Metabarcoding to monitor the crustacean zooplankton of a lake improves when using a reference DNA library from local samples
Journal of Limnology
2023
A metabarcode based (species) inventory of the northern Adriatic phytoplankton
Biodiversity Data Journal
2023
Prey choice in insectivorous steppe passerines: New insights from DNA metabarcoding
Global Ecology and Conservation
2023
Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods
Metabarcoding and Metagenomics
2023
DNA metabarcoding on repeat: Sequencing data of marine macrobenthos are reproducible and robust across labs and protocols
Ecological Indicators
2022
Metabarcoding hyperdiverse kelp holdfast communities on temperate reefs: An experimental approach to inform future studies
Environmental DNA
2022
Benthic invertebrates in Svalbard fjords—when metabarcoding does not outperform traditional biodiversity assessment
PeerJ
2022
The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs
Communications Biology
2022
Metabarcoding of stomach contents and fecal samples provide similar insights about Seaside Sparrow diet
Ornithological Applications
2022
DNA Metabarcoding Enables High-Throughput Detection of Spotted Wing Drosophila (Drosophila suzukii) Within Unsorted Trap Catches
Frontiers in Ecology and Evolution
2022
Coral Reefs of the World
2022
Overcoming the pitfalls of merging dietary metabarcoding into ecological networks
Methods in Ecology and Evolution
2022
Environmental DNA as a tool for biodiversity monitoring in aquatic ecosystems – a review
Journal of Threatened Taxa
2022
Hide ‘n seq: Direct versus indirect metabarcoding of coral reef cryptic communities
Environmental DNA
2022
Sponging up diversity: Evaluating metabarcoding performance for a taxonomically challenging phylum within a complex cryptobenthic community
Environmental DNA
2022
An efficient early‐pooling protocol for environmental DNA metabarcoding
Environmental DNA
2022
Do pseudogenes pose a problem for metabarcoding marine animal communities?
Molecular Ecology Resources
2022
Strategies for sample labelling and library preparation in DNA metabarcoding studies
Molecular Ecology Resources
2022
Towards reproducible metabarcoding data: Lessons from an international cross‐laboratory experiment
Molecular Ecology Resources
2022
Recommendations for the preservation of environmental samples in diatom metabarcoding studies
Metabarcoding and Metagenomics
2022
Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers
PeerJ
2022
Experimental validation of taxon‐specific mini‐barcode primers for metabarcoding of zooplankton
Ecological Applications
2022
Strategies for molecular authentication of herbal products: from experimental design to data analysis
Chinese Medicine
2022
Advances in Marine Biology
2022
COI Metabarcoding of Zooplankton Species Diversity for Time-Series Monitoring of the NW Atlantic Continental Shelf
Frontiers in Marine Science
2021
Decision‐making and best practices for taxonomy‐free environmental DNA metabarcoding in biomonitoring using Hill numbers
Molecular Ecology
2021
Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates
Metabarcoding and Metagenomics
2021
Towards harmonization of DNA metabarcoding for monitoring marine macrobenthos: the effect of technical replicates and pooled DNA extractions on species detection
Metabarcoding and Metagenomics
2021
Highly comparable metabarcoding results from MGI-Tech and Illumina sequencing platforms
PeerJ
2021
Biases in bulk: DNA metabarcoding of marine communities and the methodology involved
Molecular Ecology
2021
Capabilities and limitations of using DNA metabarcoding to study plant–pollinator interactions
Molecular Ecology
2021
Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches
Science of The Total Environment
2021
DNA metabarcoding marker choice skews perception of marine eukaryotic biodiversity
Environmental DNA
2021
The network structure of intertidal meiofaunal communities from environmental DNA metabarcoding surveys in Northwest Iberia
Aquatic Sciences
2021
Recommendations for interpreting zooplankton metabarcoding and integrating molecular methods with morphological analyses
ICES Journal of Marine Science
2021
Improving metabarcoding taxonomic assignment: A case study of fishes in a large marine ecosystem
Molecular Ecology Resources
2021
Monitoring fish communities through environmental DNA metabarcoding in the fish pass system of the second largest hydropower plant in the world
Scientific Reports
2021
Diversity Metrics Are Robust to Differences in Sampling Location and Depth for Environmental DNA of Plants in Small Temperate Lakes
Frontiers in Environmental Science
2021
Population Dynamics and Yeast Diversity in Early Winemaking Stages without Sulfites Revealed by Three Complementary Approaches
Applied Sciences
2021
Grab what you can—an evaluation of spatial replication to decrease heterogeneity in sediment eDNA metabarcoding
PeerJ
2021
Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets
BMC Bioinformatics
2021
Revisiting the effect of PCR replication and sequencing depth on biodiversity metrics in environmental DNA metabarcoding
Ecology and Evolution
2021
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates
Water
2020
Lab experience with seafood control at the undergraduate level: Cephalopods as a case study
Biochemistry and Molecular Biology Education
2020
Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding
Estuarine, Coastal and Shelf Science
2020
Estimation of the relative abundance of species in artificial mixtures of insects using low-coverage shotgun metagenomics
Metabarcoding and Metagenomics
2020
Metabarcoding Analyses and Seasonality of the Zooplankton Community at BATS
Frontiers in Marine Science
2020
18S-V9 DNA metabarcoding detects the effect of water-quality impairment on stream biofilm eukaryotic assemblages
Ecological Indicators
2020
Comparison of invertebrate diversity in lake waters and their resting eggs in sediments, as revealed by high-throughput sequencing (HTS)
Knowledge & Management of Aquatic Ecosystems
2020
Enhancing DNA metabarcoding performance and applicability with bait capture enrichment and DNA from conservative ethanol
Molecular Ecology Resources
2020
Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems
Nature Communications
2020
Applications of environmental DNA (eDNA) in ecology and conservation: opportunities, challenges and prospects
Biodiversity and Conservation
2020
Exploring the potential of metabarcoding to disentangle macroinvertebrate community dynamics in intermittent streams
Metabarcoding and Metagenomics
2019
Promises and pitfalls of using high‐throughput sequencing for diet analysis
Molecular Ecology Resources
2019
Assessing the influence of sample tagging and library preparation on DNA metabarcoding
Molecular Ecology Resources
2019
Non‐specific amplification compromises environmental DNA metabarcoding with COI
Methods in Ecology and Evolution
2019
Influence of preservation methods, sample medium and sampling time on eDNA recovery in a neotropical river
Environmental DNA
2019
The mycobiome of Australian tree hollows in relation to the Cryptococcus gattii and C. neoformans species complexes
Ecology and Evolution
2019
Assessing different components of diversity across a river network using eDNA
Environmental DNA
2019
The choice of universal primers and the characteristics of the species mixture determine when DNA metabarcoding can be quantitative
Molecular Ecology
2019
Metabarcoding a diverse arthropod mock community
Molecular Ecology Resources
2019
Biodiversity assessment of tropical shelf eukaryotic communities via pelagic eDNA metabarcoding
Ecology and Evolution
2019
Dietary partitioning promotes the coexistence of planktivorous species on coral reefs
Molecular Ecology
2019
How quantitative is metabarcoding: A meta‐analytical approach
Molecular Ecology
2019
Development of quantitative PCR for the detection of Alkalilimnicola ehrlichii, Thioalkalivibrio sulfidiphilus and Thioalkalibacter halophilus in gas biodesulfurization processes
AMB Express
2019
Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance
GigaScience
2019
Current practice in plankton metabarcoding: optimization and error management
Journal of Plankton Research
2019
Validation of COI metabarcoding primers for terrestrial arthropods
PeerJ
2019
Scaling up DNA metabarcoding for freshwater macrozoobenthos monitoring
Freshwater Biology
2019
Reconstructing hyperdiverse food webs: Gut content metabarcoding as a tool to disentangle trophic interactions on coral reefs
Methods in Ecology and Evolution
2019
Impacts of DNA extraction and PCR on DNA metabarcoding estimates of soil biodiversity
Methods in Ecology and Evolution
2018
Cross-shelf investigation of coral reef cryptic benthic organisms reveals diversity patterns of the hidden majority
Scientific Reports
2018
A broadly applicable COI primer pair and an efficient single‐tube amplicon library preparation protocol for metabarcoding
Ecology and Evolution
2018
Ecological influence of sediment bypass tunnels on macroinvertebrates in dam-fragmented rivers by DNA metabarcoding
Scientific Reports
2018
Advances in Ecological Research
2018
Proper experimental design requires randomization/balancing of molecular ecology experiments
Ecology and Evolution
2018
Estimating intraspecific genetic diversity from community DNA metabarcoding data
PeerJ
2018
DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers
PeerJ
2018
Choice of DNA extraction method affects DNA metabarcoding of unsorted invertebrate bulk samples
Metabarcoding and Metagenomics
2018
Advances in Ecological Research
2018
Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method
Metabarcoding and Metagenomics
2018
Combining morpho-taxonomy and metabarcoding enhances the detection of non-indigenous marine pests in biofouling communities
Scientific Reports
2018
Sorting specimen‐rich invertebrate samples with cost‐effective NGS barcodes: Validating a reverse workflow for specimen processing
Molecular Ecology Resources
2018
Slippage of degenerate primers can cause variation in amplicon length
Scientific Reports
2018
Minimizing polymerase biases in metabarcoding
Molecular Ecology Resources
2018
Scrutinizing key steps for reliable metabarcoding of environmental samples
Methods in Ecology and Evolution
2018
“Pitfalls in relative abundance estimation using eDNA metabarcoding”
Molecular Ecology Resources
2018
Advantages and Limitations of Environmental DNA/RNA Tools for Marine Biosecurity: Management and Surveillance of Non-indigenous Species
Frontiers in Marine Science
2017
Short COI markers for freshwater macroinvertebrate metabarcoding
Metabarcoding and Metagenomics
2017
Sorting things out: Assessing effects of unequal specimen biomass on DNA metabarcoding
Ecology and Evolution
2017
A from‐benchtop‐to‐desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies
Molecular Ecology Resources
2017
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
Molecular Ecology
2017
Cryptic Zooplankton Diversity Revealed by a Metagenetic Approach to Monitoring Metazoan Communities in the Coastal Waters of the Okhotsk Sea, Northeastern Hokkaido
Frontiers in Marine Science
2017
Microbial Markers in the Diagnosis of Colorectal Cancer: The Promise, Reality and Challenge
Future Microbiology
Additional cited-by details will be shown when available from Crossref