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2023	Genome Dynamics and Temperature Adaptation During Experimental Evolution of Obligate Intracellular Bacteria Genome Biology and Evolution Paul Herrera, Lisa Schuster, Markus Zojer, Hyunsoo Na, Jasmin Schwarz, Florian Wascher, Thomas Kempinger, Andreas Regner, Thomas Rattei, Matthias Horn
2023	2023 International Conference on Emerging Trends in Networks and Computer Communications (ETNCC) Kirti Bhadhadhara, Muthukumar Balamurugan, Neeraj Bharti, Ruma Banerjee, Sunitha Manjari Kasibhatla, Rajendra Joshi
2022	Understanding the Genetic Diversity of Mycobacterium africanum Using Phylogenetics and Population Genomics Approaches Frontiers in Genetics Muthukumar Balamurugan, Ruma Banerjee, Sunitha Manjari Kasibhatla, Archana Achalere, Rajendra Joshi
2022	Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integrated multi-omic analyses Microbiome B. J. Kunath, O. Hickl, P. Queirós, C. Martin-Gallausiaux, L. A. Lebrun, R. Halder, C. C. Laczny, T. S. B. Schmidt, M. R. Hayward, D. Becher, A. Heintz-Buschart, C. de Beaufort, P. Bork, P. May, P. Wilmes
2021	Metagenome SNP calling via read-colored de Bruijn graphs Bioinformatics Bahar Alipanahi, Martin D Muggli, Musa Jundi, Noelle R Noyes, Christina Boucher
2020	Molecular causes of an evolutionary shift along the parasitism–mutualism continuum in a bacterial symbiont Proceedings of the National Academy of Sciences Paul Herrera, Lisa Schuster, Cecilia Wentrup, Lena König, Thomas Kempinger, Hyunsoo Na, Jasmin Schwarz, Stephan Köstlbacher, Florian Wascher, Markus Zojer, Thomas Rattei, Matthias Horn
2020	Mycobacterium bovis: From Genotyping to Genome Sequencing Microorganisms Ana M. S. Guimaraes, Cristina K. Zimpel
2020	An insight into the genome of extensively drug-resistant and uropathogenic Citrobacter werkmanii Journal of Global Antimicrobial Resistance Shadab Parvez, Asad U. Khan, Gurwinder Kaur, Mohamed Barakat, Philippe Ortet, Shanmugam Mayilraj
2019	Current and Promising Approaches to Identify Horizontal Gene Transfer Events in Metagenomes Genome Biology and Evolution Gavin M Douglas, Morgan G I Langille
2019	Within-Host Genomic Diversity of Candida albicans in Healthy Carriers Scientific Reports Emilie Sitterlé, Corinne Maufrais, Natacha Sertour, Matthieu Palayret, Christophe d’Enfert, Marie-Elisabeth Bougnoux
2018	Genome-wide detection of conservative site-specific recombination in bacteria PLOS Genetics Ognjen Sekulovic, Elizabeth Mathias Garrett, Jacob Bourgeois, Rita Tamayo, Aimee Shen, Andrew Camilli
2018	Population Genomics Vincent J. Denef
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