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2024	Altered circular RNA expressions in extracellular vesicles from bronchoalveolar lavage fluids in mice after bacterial infections Frontiers in Immunology Heedoo Lee, Rokgi Hong, Yang Jin
2024	FL-circAS: an integrative resource and analysis for full-length sequences and alternative splicing of circular RNAs with nanopore sequencing Nucleic Acids Research Tai-Wei Chiang, Song-En Jhong, Yu-Chen Chen, Chia-Ying Chen, Wei-Sheng Wu, Trees-Juen Chuang
2023	Full-length circular RNA profiling by nanopore sequencing with CIRI-long Nature Protocols Lingling Hou, Jinyang Zhang, Fangqing Zhao
2023	CYCLeR—a novel tool for the full isoform assembly and quantification of circRNAs Nucleic Acids Research Stefan R Stefanov, Irmtraud M Meyer
2022	A survey of circular RNAs in complex diseases: databases, tools and computational methods Briefings in Bioinformatics Qiu Xiao, Jianhua Dai, Jiawei Luo
2022	Emerging roles of circular RNAs in retinal diseases Neural Regeneration Research Aneliya Hanineva, KarenSophia Park, JoshuaJ Wang, MargaretM DeAngelis, MichaelH Farkas, SarahX Zhang
2022	Reconstruction of Full-Length circRNA Sequences Using Chimeric Alignment Information International Journal of Molecular Sciences Md. Tofazzal Hossain, Jingjing Zhang, Md. Selim Reza, Yin Peng, Shengzhong Feng, Yanjie Wei
2021	Sex-Biased lncRNA Signature in Fetal Growth Restriction (FGR) Cells Aleksandra Lipka, Jan Pawel Jastrzebski, Lukasz Paukszto, Karol Gustaw Makowczenko, Elzbieta Lopienska-Biernat, Marek Gowkielewicz, Ewa Lepiarczyk, Marta Wiszpolska, Mariusz Krzysztof Majewski, Marta Majewska
2021	The bioinformatics toolbox for circRNA discovery and analysis Briefings in Bioinformatics Liang Chen, Changliang Wang, Huiyan Sun, Juexin Wang, Yanchun Liang, Yan Wang, Garry Wong
2021	Practical guide for circular RNA analysis: Steps, tips, and resources WIREs RNA Dimitrios Tsitsipatis, Myriam Gorospe
2021	Systems Medicine Ling Kui, Min Tang
2021	Reconstruction of circular RNAs using Illumina and Nanopore RNA-seq datasets Methods Jinyang Zhang, Fangqing Zhao
2021	Quantifying full-length circular RNAs in cancer Genome Research Ken Hung-On Yu, Christina Huan Shi, Bo Wang, Savio Ho-Chit Chow, Grace Tin-Yun Chung, Raymond Wai-Ming Lung, Ke-En Tan, Yat-Yuen Lim, Anna Chi-Man Tsang, Kwok-Wai Lo, Kevin Y. Yip
2021	Identification of Circular RNAs in the Anterior Pituitary in Rats Treated with GnRH Animals Hai-Xiang Guo, Bao Yuan, Meng-Ting Su, Yi Zheng, Jin-Yu Zhang, Dong-Xu Han, Hao-Qi Wang, Yi-Jie Huang, Hao Jiang, Jia-Bao Zhang
2021	Methods in Molecular Biology Enrico Gaffo, Alessia Buratin, Anna Dal Molin, Stefania Bortoluzzi
2021	Circular versus linear RNA topology: different modes of RNA–RNA interactions in vitro and in human cells RNA Biology Sonja Petkovic, Sarah Graff, Nina Feller, Julia Berghaus, Vanessa-Patricia Ruppert, Jasmin Dülfer, Georg Sczakiel
2021	Function of Circular RNAs in Fish and Their Potential Application as Biomarkers International Journal of Molecular Sciences Golam Rbbani, Artem Nedoluzhko, Jorge Galindo-Villegas, Jorge M. O. Fernandes
2020	The mechanism and detection of alternative splicing events in circular RNAs PeerJ Xiaohan Li, Bing Zhang, Fuyu Li, Kequan Yu, Yunfei Bai
2020	RNA-seq reveals the circular RNA and miRNA expression profile of peripheral blood mononuclear cells in patients with rheumatoid arthritis Bioscience Reports Jianting Wen, Jian Liu, Pingheng Zhang, Hui Jiang, Ling Xin, Lei Wan, Yue Sun, Dan Huang, Yanqiu Sun, Yan Long, Ying Zhang, Bingxi Bao, Guanghan Sun
2020	FcircSEC: An R Package for Full Length circRNA Sequence Extraction and Classification International Journal of Genomics Md. Tofazzal Hossain, Yin Peng, Shengzhong Feng, Yanjie Wei
2020	Economic impact of keratoconus using a health expenditure questionnaire: A patient perspective Clinical & Experimental Ophthalmology Elsie Chan, Paul N. Baird, Sara Vogrin, Vijaya Sundararajan, Mark D. Daniell, Srujana Sahebjada
2020	Identification and characterization of circular RNAs during wood formation of poplars in acclimation to low nitrogen availability Planta Huimin Liu, Wanwen Yu, Jiangting Wu, Zhuorong Li, Hui Li, Jing Zhou, Jingjing Hu, Yan Lu
2020	CircAtlas: an integrated resource of one million highly accurate circular RNAs from 1070 vertebrate transcriptomes Genome Biology Wanying Wu, Peifeng Ji, Fangqing Zhao
2020	Disease-Associated Circular RNAs: From Biology to Computational Identification BioMed Research International Min Tang, Ling Kui, Guanyi Lu, Wenqiang Chen
2020	Reinventing the Wheel: Synthetic Circular RNAs for Mammalian Cell Engineering Trends in Biotechnology Alan Costello, Nga T. Lao, Niall Barron, Martin Clynes
2020	Advances in circular RNAs and their role in glioma (Review) International Journal of Oncology Yuhao Zhang, Xiaomeng Lin, Xiuchao Geng, Liang Shi, Qiang Li, Fulin Liu, Chuan Fang, Hong Wang
2019	Methods in Molecular Biology Disha Sharma, Paras Sehgal, Judith Hariprakash, Sridhar Sivasubbu, Vinod Scaria
2019	CircRNAwrap – a flexible pipeline for circRNA identification, transcript prediction, and abundance estimation FEBS Letters Lin Li, Dechao Bu, Yi Zhao
2019	Reconstruction of full-length circular RNAs enables isoform-level quantification Genome Medicine Yi Zheng, Peifeng Ji, Shuai Chen, Lingling Hou, Fangqing Zhao
2019	Ularcirc: visualization and enhanced analysis of circular RNAs via back and canonical forward splicing Nucleic Acids Research David T Humphreys, Nicolas Fossat, Madeleine Demuth, Patrick P L Tam, Joshua W K Ho
2019	Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq Data International Journal of Molecular Sciences Giulio Ferrero, Nicola Licheri, Lucia Coscujuela Tarrero, Carlo De Intinis, Valentina Miano, Raffaele Adolfo Calogero, Francesca Cordero, Michele De Bortoli, Marco Beccuti
2019	Computational approaches for circular RNA analysis WIREs RNA Tobias Jakobi, Christoph Dieterich
2019	Circular RNA Expression Profiling and the Potential Role of hsa_circ_0089172 in Hashimoto’s Thyroiditis via Sponging miR125a-3p Molecular Therapy - Nucleic Acids Si Xiong, Huiyong Peng, Xiangmei Ding, Xuehua Wang, Li Wang, Chenguang Wu, Shengjun Wang, Huaxi Xu, Yingzhao Liu
2019	circtools—a one-stop software solution for circular RNA research Bioinformatics Tobias Jakobi, Alexey Uvarovskii, Christoph Dieterich
2018	Heat stress alters genome-wide profiles of circular RNAs in Arabidopsis Plant Molecular Biology Ting Pan, Xiuqiang Sun, Yangxuan Liu, Hui Li, Guangbin Deng, Honghui Lin, Songhu Wang
2018	Computational Strategies for Exploring Circular RNAs Trends in Genetics Yuan Gao, Fangqing Zhao
2018	Advances in Experimental Medicine and Biology Siti Aishah Sulaiman, Nor Azian Abdul Murad, Ezanee Azlina Mohamad Hanif, Nadiah Abu, Rahman Jamal
2018	Circular RNAs in the cardiovascular system Non-coding RNA Research Clarissa P.C. Gomes, Antonio Salgado-Somoza, Esther E. Creemers, Christoph Dieterich, Mitja Lustrek, Yvan Devaux
2018	A comprehensive review of circRNA: from purification and identification to disease marker potential PeerJ Sheng Xu, LuYu Zhou, Murugavel Ponnusamy, LiXia Zhang, YanHan Dong, YanHui Zhang, Qi Wang, Jing Liu, Kun Wang
2018	Methods in Molecular Biology Tobias Jakobi, Christoph Dieterich
2018	Profiling and functional analysis of circular RNAs in acute promyelocytic leukemia and their dynamic regulation during all-trans retinoic acid treatment Cell Death & Disease Shufen Li, Yunlin Ma, Yun Tan, Xuefei Ma, Ming Zhao, Bing Chen, Rongsheng Zhang, Zhu Chen, Kankan Wang
2017	Circular RNA expression profiles reveal that hsa_circ_0018289 is up-regulated in cervical cancer and promotes the tumorigenesis Oncotarget Ya-Li Gao, Ming-Yun Zhang, Bo Xu, Li-Jie Han, Shou-Feng Lan, Ju Chen, Yu-Jin Dong, Li-Li Cao
2017	Circular RNA hsa_circ_000984 promotes colon cancer growth and metastasis by sponging miR-106b Oncotarget Xiao-Wu Xu, Bo-An Zheng, Zhi-Ming Hu, Zhen-Yuan Qian, Chao-Jie Huang, Xi-Qiang Liu, Wei-Ding Wu
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