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2025
Contrasting diversity patterns between microeukaryotic and prokaryotic communities in cold-seep sediments
ISME Communications
2025
Recent Trends in Marine Toxicological Assessment
2025
Data on the diet and nutrition of urban and rural bumblebees
Scientific Data
2025
Comparison of Morphological and DNA‐Based Identification Methods to Assess Earthworm (Clitellata: Lumbricidae) Diversity at 25 Permanent Soil Monitoring Sites in Germany
Ecology and Evolution
2025
Integrating traditional and innovative monitoring approaches to monitor the marine biodiversity in the Tyrrhenian Sea (Mediterranean sea)
Marine Environmental Research
2025
A critical review on the application of environmental DNA (eDNA) metagenomics in monitoring and assessing biological communities post marine oil spills
Science of The Total Environment
2024
Evaluating the effectiveness of the eRNA technique in monitoring fish biodiversity – A case study in the Qingdao offshore, China
Global Ecology and Conservation
2024
Baltic Sea coastal sediment-bound eukaryotes have increased year-round activities under predicted climate change related warming
Frontiers in Microbiology
2024
Metabarcoding Reveals Meiofaunal Diversity in Rhodolith Beds From SE Brazil
Aquatic Conservation: Marine and Freshwater Ecosystems
2024
Vulnerability of Arctic Ocean microbial eukaryotes to sea ice loss
Scientific Reports
2024
Nanopore environmental DNA sequencing of catch water for estimating species composition in demersal bottom trawl fisheries
Environmental DNA
2024
North Atlantic deep-sea benthic biodiversity unveiled through sponge natural sampler DNA
Communications Biology
2024
Environmental DNA Metabarcoding of Cephalopod Diversity in the Tyrrhenian Deep Sea
Journal of Marine Science and Engineering
2024
Environmental DNA methods for biosecurity and invasion biology in terrestrial ecosystems: Progress, pitfalls, and prospects
Science of The Total Environment
2024
A sedimentary DNA record of the Atacama Trench reveals biodiversity changes in the most productive marine ecosystem
Global Change Biology
2024
Metazoan diversity and community assemblages in sediments across a Western Pacific Trench-Arc-Basin system: insights from eDNA metabarcoding
Frontiers in Marine Science
2024
Molecular characterization and phylogenetic position of the giant deep-sea oyster Neopycnodonte zibrowii Gofas, Salas & Taviani, 2009
Zoosystematics and Evolution
2023
Optimization of environmental DNA analysis using pumped deep-sea water for the monitoring of fish biodiversity
Frontiers in Marine Science
2023
Distribution Patterns of Benthic Protist Communities Depending on Depth Revealed by Environmental Sequencing—From the Sublittoral to the Deep Sea
Microorganisms
2023
Trawling for evidence: An ecosystem-based multi-method trawling impact assessment
Fisheries Research
2023
Advances in Ecological Research
2023
Outcomes of Presurgical Nasoalveolar Molding using Modified Nostril Retainers in Patients with Unilateral Cleft Lip and Palate at an Average Follow-up of 2 Years
Turkish Journal of Orthodontics
2023
Monitoring mosquito richness in an understudied area: can environmental DNA metabarcoding be a complementary approach to adult trapping?
Bulletin of Entomological Research
2023
Metabarcoding the eukaryotic community of a threatened, iconic Mediterranean habitat: Posidonia oceanica seagrass meadows
Frontiers in Marine Science
2022
Evaluating eDNA for Use within Marine Environmental Impact Assessments
Journal of Marine Science and Engineering
2022
Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
Science of The Total Environment
2022
Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
Science Advances
2022
Deciphering the molecular signal from past and alive bacterial communities in aquatic sedimentary archives
Molecular Ecology Resources
2022
Environmental nucleic acids: A field‐based comparison for monitoring freshwater habitats using eDNA and eRNA
Molecular Ecology Resources
2022
Amplicon sequence variant-based meiofaunal community composition revealed by DADA2 tool is compatible with species composition
Marine Genomics
2022
Advances in Marine Biology
2022
First eumonostiliferous nemertean from the Nishi-Shichito Ridge, Genrokunemertes obesa gen. et sp. nov. (Eumonostilifera, Nemertea)
PeerJ
2022
An assessment of minimum sequence copy thresholds for identifying and reducing the prevalence of artefacts in dietary metabarcoding data
Methods in Ecology and Evolution
2022
Towards a multisensor station for automated biodiversity monitoring
Basic and Applied Ecology
2022
Monitoring of benthic eukaryotic communities in two tropical coastal lagoons through eDNA metabarcoding: a spatial and temporal approximation
Scientific Reports
2022
Methods in Molecular Biology
2022
Comparative environmental RNA and DNA metabarcoding analysis of river algae and arthropods for ecological surveys and water quality assessment
Scientific Reports
2022
Quantification of marine benthic communities with metabarcoding
Molecular Ecology Resources
2022
Long-term archival of environmental samples empowers biodiversity monitoring and ecological research
Environmental Sciences Europe
2022
Comparison of structure and diversity of benthic communities in the Okinawa Trough and Mariana Trench by environmental DNA metabarcoding
Deep Sea Research Part I: Oceanographic Research Papers
2022
Detection of community-wide impacts of bottom trawl fishing on deep-sea assemblages using environmental DNA metabarcoding
Marine Pollution Bulletin
2022
Metabarcoding reveals massive species diversity of Diptera in a subtropical ecosystem
Ecology and Evolution
2021
Fish environmental RNA enables precise ecological surveys with high positive predictivity
Ecological Indicators
2021
DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review
Frontiers in Marine Science
2021
Combining Multiple Markers in Environmental DNA Metabarcoding to Assess Deep-Sea Benthic Biodiversity
Frontiers in Marine Science
2021
Empirical evidence for concerted evolution in the 18S rDNA region of the planktonic diatom genus Chaetoceros
Scientific Reports
2021
Eukaryotic Biodiversity and Spatial Patterns in the Clarion-Clipperton Zone and Other Abyssal Regions: Insights From Sediment DNA and RNA Metabarcoding
Frontiers in Marine Science
2021
Horizontal and vertical small-scale patterns of protist communities at the Atlantic deep-sea floor
Deep Sea Research Part I: Oceanographic Research Papers
2021
Environmental DNA reveals aquatic biodiversity of an urban backwater area, southeast coast of India
Marine Pollution Bulletin
2021
Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap
Molecular Ecology
2021
Grab what you can—an evaluation of spatial replication to decrease heterogeneity in sediment eDNA metabarcoding
PeerJ
2021
Phytoplankton settling quality has a subtle but significant effect on sediment microeukaryotic and bacterial communities
Scientific Reports
2021
Marine biomonitoring with eDNA: Can metabarcoding of water samples cut it as a tool for surveying benthic communities?
Molecular Ecology
2021
Integrating eDNA metabarcoding and simultaneous underwater visual surveys to describe complex fish communities in a marine biodiversity hotspot
Molecular Ecology Resources
2020
Bats actively prey on mosquitoes and other deleterious insects in rice paddies: Potential impact on human health and agriculture
Pest Management Science
2020
Bacterial Composition and Diversity in Deep-Sea Sediments from the Southern Colombian Caribbean Sea
Diversity
2020
A Systematic Review of Sources of Variability and Uncertainty in eDNA Data for Environmental Monitoring
Frontiers in Ecology and Evolution
2020
From Sea Surface to Seafloor: A Benthic Allochthonous eDNA Survey for the Abyssal Ocean
Frontiers in Marine Science
2020
Metabarcoding on both environmental DNA and RNA highlights differences between fungal communities sampled in different habitats
PLOS ONE
2020
Environmental DNA surveys detect distinct metazoan communities across abyssal plains and seamounts in the western Clarion Clipperton Zone
Molecular Ecology
2020
Meiofaunal diversity at a seamount in the pacific ocean: A comprehensive study using environmental DNA and RNA
Deep Sea Research Part I: Oceanographic Research Papers
2020
A practical guide to sample preservation and pre‐PCR processing of aquatic environmental DNA
Molecular Ecology Resources
2020
A Molecular Approach to Explore the Background Benthic Fauna Around a Hydrothermal Vent and Their Larvae: Implications for Future Mining of Deep-Sea SMS Deposits
Frontiers in Marine Science
2020
DNA Metabarcoding of Deep-Sea Sediment Communities Using COI: Community Assessment, Spatio-Temporal Patterns and Comparison with 18S rDNA
Diversity
2020
Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding
Estuarine, Coastal and Shelf Science
2020
Advances in Marine Biology
2020
Meiofauna metabarcoding in Lima estuary (Portugal) suggests high taxon replacement within a background of network stability
Regional Studies in Marine Science
2020
An Assessment of Environmental Metabarcoding Protocols Aiming at Favoring Contemporary Biodiversity in Inventories of Deep-Sea Communities
Frontiers in Marine Science
2020
DNA metabarcoding of stream invertebrates reveals spatio-temporal variation but consistent status class assessments in a natural and urban river
Ecological Indicators
2019
Digging for DNA at depth: rapid universal metabarcoding surveys (RUMS) as a tool to detect coral reef biodiversity across a depth gradient
PeerJ
2019
Evaluating putative ecological drivers of microcystin spatiotemporal dynamics using metabarcoding and environmental data
Harmful Algae
2019
Diversity of Wadden Sea macrofauna and meiofauna communities highest in DNA from extractions preceded by cell lysis
Journal of Sea Research
2019
A review on the applications and recent advances in environmental DNA (eDNA) metagenomics
Reviews in Environmental Science and Bio/Technology
2019
Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA
Global Ecology and Conservation
2019
Cumulative impact of long-term intensive mariculture on total and active bacterial communities in the core sediments of the Ailian Bay, North China
Science of The Total Environment
2019
Microbial Community Structure and Functionality in the Deep Sea Floor: Evaluating the Causes of Spatial Heterogeneity in a Submarine Canyon System (NW Mediterranean, Spain)
Frontiers in Marine Science
2019
Linking Environmental DNA and RNA for Improved Detection of the Marine Invasive Fanworm Sabella spallanzanii
Frontiers in Marine Science
2019
Cobble community DNA as a tool to monitor patterns of biodiversity within kelp forest ecosystems
Molecular Ecology Resources
2019
A global metabarcoding analysis expands molecular diversity of Platyhelminthes and reveals novel early-branching clades
Biology Letters
2019
The effects of spatial and temporal replicate sampling on eDNA metabarcoding
PeerJ
2019
DNA metabarcoding reveals modern and past eukaryotic communities in a high-mountain peat bog system
Journal of Paleolimnology
2018
Diatom diversity through HTS-metabarcoding in coastal European seas
Scientific Reports
2018
Disentangling protist communities identified from DNA and RNA surveys in the Pearl River–South China Sea Continuum during the wet and dry seasons
Molecular Ecology
2018
Metabarcoding analysis on European coastal samples reveals new molecular metazoan diversity
Scientific Reports
2018
A comparative analysis of metabarcoding and morphology‐based identification of benthic communities across different regional seas
Ecology and Evolution
2018
Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes
Scientific Reports
2018
Environment and host identity structure communities of green algal symbionts in lichens
New Phytologist
2018
Under the canopy: Community-wide effects of invasive algae in Marine Protected Areas revealed by metabarcoding
Marine Pollution Bulletin
2018
DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers
PeerJ
2018
Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing
Scientific Reports
2017
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
Molecular Ecology
2017
DNA in a bottle—Rapid metabarcoding survey for early alerts of invasive species in ports
PLOS ONE
2017
Spatial distribution of environmental DNA in a nearshore marine habitat
PeerJ
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