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2025	LTR retrotransposon-derived novel lncRNA2 enhances cold tolerance in Moso bamboo by modulating antioxidant activity and photosynthetic efficiency PeerJ Jiamin Zhao, Yiqian Ding, Muthusamy Ramakrishnan, Long-Hai Zou, Yujing Chen, Mingbing Zhou
2025	Characterization of the JAZ family in Osmanthus fragrans and the role of OfLJAZ2 in flavonoid synthesis mediated regulation of salt and drought stress tolerance Plant Physiology and Biochemistry Wenle Li, Shumin Yu, Kaimei Zhang, Shunran Zhang, Yan Xiang, Yangang Lan
2025	Unlocking bamboo's fast growth: Exploring the vital role of non‐structural carbohydrates (NSCs) The Plant Journal Yu Chen, Meng Tang, Yu‐Chen Song, Meisam Zargar, Mo‐Xian Chen, Shu‐Yan Lin, Fu‐Yuan Zhu, Tao Song
2025	Investigating TIFY Genes for Salt Stress Adaptation in Quinoa (Chenopodium quinoa Willd.): A Genome-Wide Approach Erzincan Üniversitesi Fen Bilimleri Enstitüsü Dergisi Esma Yigider
2025	Integrative analysis reveals cold acclimation mechanisms in Bambusa multiplex with comparative insights from Bambusa ventricosa and Phyllostachys edulis Current Plant Biology Xiumin Zhao, Yalan Chen, Zhewei Zhang, Zishan Ahmad, Krishnamurthi Keerthana, Venkatesan Vijayakanth, Yongqi Zhi, Ming Chen, Feng Que, Muthusamy Ramakrishnan, Qiang Wei
2024	Genome-Wide Analysis of HECT E3 Ligases Members in Phyllostachys edulis Provides Insights into the Role of PeHECT1 in Plant Abiotic Stress Response International Journal of Molecular Sciences Xinru Xie, Songping Hu, Linxiu Liu, Huanhuan Pan, Hu Huang, Xun Cao, Guirong Qiao, Xiaojiao Han, Wenmin Qiu, Zhuchou Lu, Renying Zhuo, Jing Xu
2024	Abiotic stress-induced DNA methylation in transposable elements and their transcripts reveals a multi-layered response in Moso bamboo Industrial Crops and Products Yiqian Ding, Long-Hai Zou, Muthusamy Ramakrishnan, Yujing Chen, Bailiang Zhu, Lu Yu, Mingbing Zhou
2024	Genome-Wide Identification and Expression Pattern Analysis of TIFY Family Genes Reveal Their Potential Roles in Phalaenopsis aphrodite Flower Opening International Journal of Molecular Sciences Yunxiao Guan, Qiaoyu Zhang, Minghe Li, Junwen Zhai, Shasha Wu, Sagheer Ahmad, Siren Lan, Donghui Peng, Zhong-Jian Liu
2024	Genome-Wide Identification and Characterization of the TIFY Gene Family and Their Expression Patterns in Response to MeJA and Aluminum Stress in Centipedegrass (Eremochloa ophiuroides) Plants Haoran Wang, Yuan Zhang, Ling Zhang, Xiaohui Li, Xiang Yao, Dongli Hao, Hailin Guo, Jianxiu Liu, Jianjian Li
2024	Genome-wide investigation of the TIFY transcription factors in alfalfa (Medicago sativa L.): identification, analysis, and expression BMC Plant Biology Qi Chen, Rui Dai, Shuang Shuang, Yan Zhang, Xiaowei Huo, Fengling Shi, Zhiqiang Zhang
2024	The Moso Bamboo D-Type Cell Cycle Protein Family: Genome Organization, Phylogeny, and Expression Patterns Forests Hui Fang, Changhong Mu, Jutang Jiang, Jian Gao, Zhanchao Cheng
2024	Genome-wide identification, characterization, and expression pattern analysis of the JAZ gene family in Moso bamboo during rapid shoot development Advances in Bamboo Science Xueyun Xuan, Shiying Su, Jiaqi Tan, Hui Guo, Yang Jiao, Zhijun Zhang
2024	Arbuscular Mycorrhizal Fungi and Higher Plants Vinay Shankar, Amanso Tayang, Heikham Evelin
2023	Integrated Physiological and Transcriptomic Analyses Revealed Improved Cold Tolerance in Cucumber (Cucumis sativus L.) by Exogenous Chitosan Oligosaccharide International Journal of Molecular Sciences Chong Tan, Na Li, Yidan Wang, Xuejing Yu, Lu Yang, Ruifang Cao, Xueling Ye
2023	Sodium Nitroprusside Improves Bamboo Resistance under Mn and Cr Toxicity with Stimulation of Antioxidants Activity, Relative Water Content, and Metal Translocation and Accumulation International Journal of Molecular Sciences Abolghassem Emamverdian, Yulong Ding, James Barker, Guohua Liu, Yang Li, Farzad Mokhberdoran
2023	Comparative Analysis of the Complete Mitochondrial Genome Sequence of an Alpine Plant Triosteum pinnatifidum Cytology and Genetics Hairui Liu, Wenhui Liu, Qingmeng Xiao, Quan Zhou, Xumin Li, Zhiwen Yao, Anqi Wang, Qingbo Gao, Shilong Chen
2023	Identification of Late Flavonoid Biosynthesis Genes of Moso Bamboo Reveals the Potential Function of PeANR4 Involved in Osmotic and Salt Stress Forests Xiaoyan Xiao, Chenglei Zhu, Kebin Yang, Yan Liu, Zhimin Gao
2023	Genome-wide analysis of the TIFY family and function of CaTIFY7 and CaTIFY10b under cold stress in pepper (Capsicum annuum L.) Frontiers in Plant Science Xiaodi Wang, Ning Li, Tianxiang Zan, Kai Xu, Shenghua Gao, Yanxu Yin, Minghua Yao, Fei Wang
2023	Comparative Physiological and Transcriptome Analyses of Tolerant and Susceptible Cultivars Reveal the Molecular Mechanism of Cold Tolerance in Anthurium andraeanum International Journal of Molecular Sciences Na Dou, Li Li, Yifu Fang, Shoujin Fan, Chunxia Wu
2023	Exogenous application of jasmonates and brassinosteroids alleviates lead toxicity in bamboo by altering biochemical and physiological attributes Environmental Science and Pollution Research Abolghassem Emamverdian, Ahlam Khalofah, Necla Pehlivan, Muhammad Zia-ur-Rehman, Yang Li, Meisam Zargar
2022	Comprehensive identification and expression analysis of the TIFY gene family in cucumber Notulae Botanicae Horti Agrobotanici Cluj-Napoca Juncheng HE, Yikeng CHENG, Lingdi XIAO, Zhaoyang HU, Yong ZHOU, Shiqiang LIU
2022	Transcriptome Analysis of Moso Bamboo (Phyllostachys edulis) Reveals Candidate Genes Involved in Response to Dehydration and Cold Stresses Frontiers in Plant Science Zhuo Huang, Peilei Zhu, Xiaojuan Zhong, Jiarui Qiu, Wenxin Xu, Li Song
2022	Genome-wide analysis of the JAZ subfamily of transcription factors and functional verification of BnC08.JAZ1-1 in Brassica napus Biotechnology for Biofuels and Bioproducts Ying Wang, Na Li, Jiepeng Zhan, Xinfa Wang, Xue-Rong Zhou, Jiaqin Shi, Hanzhong Wang
2022	Zinc Oxide Nanoparticles Improve Pleioblastus pygmaeus Plant Tolerance to Arsenic and Mercury by Stimulating Antioxidant Defense and Reducing the Metal Accumulation and Translocation Frontiers in Plant Science Abolghassem Emamverdian, Mirza Hasanuzzaman, Yulong Ding, James Barker, Farzad Mokhberdoran, Guohua Liu
2022	Benzylaminopurine and Abscisic Acid Mitigates Cadmium and Copper Toxicity by Boosting Plant Growth, Antioxidant Capacity, Reducing Metal Accumulation and Translocation in Bamboo [Pleioblastus pygmaeus (Miq.)] Plants Antioxidants Abolghassem Emamverdian, Yulong Ding, Mohammed Nasser Alyemeni, James Barker, Guohua Liu, Yang Li, Farzad Mokhberdoran, Parvaiz Ahmad
2022	Key Genes in the JAZ Signaling Pathway Are Up-Regulated Faster and More Abundantly in Caterpillar-Resistant Maize Journal of Chemical Ecology Yang Han, Dawn Luthe
2021	The PEAPOD Pathway and Its Potential To Improve Crop Yield Trends in Plant Science Michele Schneider, Nathalie Gonzalez, Laurens Pauwels, Dirk Inzé, Alexandra Baekelandt
2021	Genomic insights into growth and development of bamboos: what have we learnt and what more to discover? Trees Mridushree Basak, Smritikana Dutta, Subhadeep Biswas, Sukanya Chakraborty, Amartya Sarkar, Touhidur Rahaman, Sonali Dey, Prasun Biswas, Malay Das
2021	Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions Frontiers in Genetics Chenglei Zhu, Kebin Yang, Guangzhu Li, Ying Li, Zhimin Gao
2021	Genome-wide identification and expression analysis of the JAZ gene family in turnip Scientific Reports Kai Jia, Cunyao Yan, Jing Zhang, Yunxia Cheng, Wenwen Li, Huizhuan Yan, Jie Gao
2021	Different Physiological and Biochemical Responses of Bamboo to the Addition of TiO2 NPs under Heavy Metal Toxicity Forests Abolghassem Emamverdian, Yulong Ding, Farzad Mokhberdoran, Muthusamy Ramakrishnan, Zishan Ahmad, Yinfeng Xie
2021	Identification and evolution analysis of the JAZ gene family in maize BMC Genomics Yang Han, Dawn Luthe
2020	Genetics and genomics of moso bamboo (Phyllostachys edulis): Current status, future challenges, and biotechnological opportunities toward a sustainable bamboo industry Food and Energy Security Muthusamy Ramakrishnan, Kim Yrjälä, Kunnummal Kurungara Vinod, Anket Sharma, Jungnam Cho, Viswanathan Satheesh, Mingbing Zhou
2020	Transcriptome profiling reveals the crucial biological pathways involved in cold response in Moso bamboo (Phyllostachys edulis) Tree Physiology Yuanyuan Liu, Chu Wu, Xin Hu, Hongye Gao, Yue Wang, Hong Luo, Sen Cai, Guowei Li, Yushan Zheng, Chentao Lin, Qiang Zhu
2020	Genome-wide identification and functional analysis of the TIFY gene family in the response to multiple stresses in Brassica napus L. BMC Genomics Xin He, Yu Kang, Wenqian Li, Wei Liu, Pan Xie, Li Liao, Luyao Huang, Min Yao, Lunwen Qian, Zhongsong Liu, Chunyun Guan, Mei Guan, Wei Hua
2020	Genome-wide identification and expression analysis of jasmonate ZIM domain gene family in tuber mustard (Brassica juncea var. tumida) PLOS ONE Zhaoming Cai, Yuanqing Chen, Jingjing Liao, Diandong Wang
2019	The moss jasmonate ZIM-domain protein PnJAZ1 confers salinity tolerance via crosstalk with the abscisic acid signalling pathway Plant Science Shenghao Liu, Pengying Zhang, Chengcheng Li, Guangmin Xia
2019	Genome-wide identification and expression analysis of the MYB transcription factor in moso bamboo (Phyllostachys edulis) PeerJ Kebin Yang, Ying Li, Sining Wang, Xiurong Xu, Huayu Sun, Hansheng Zhao, Xueping Li, Zhimin Gao
2019	Evolutionary Analysis of JAZ Proteins in Plants: An Approach in Search of the Ancestral Sequence International Journal of Molecular Sciences Adrián Garrido-Bigotes, Felipe Valenzuela-Riffo, Carlos Figueroa
2019	Comprehensive Analysis of TIFY Transcription Factors and Their Expression Profiles under Jasmonic Acid and Abiotic Stresses in Watermelon International Journal of Genomics Youxin Yang, Golam Jalal Ahammed, Chunpeng Wan, Haoju Liu, Rongrong Chen, Yong Zhou
2018	Jasmonate signalling pathway in strawberry: Genome-wide identification, molecular characterization and expression of JAZs and MYCs during fruit development and ripening PLOS ONE Adrián Garrido-Bigotes, Nicolás E. Figueroa, Pablo M. Figueroa, Carlos R. Figueroa
2018	Growth Responses and Photosynthetic Indices of Bamboo Plant (Indocalamus latifolius) under Heavy Metal Stress The Scientific World Journal Abolghassem Emamverdian, Yulong Ding, Farzad Mokhberdoran, Yinfeng Xie
2018	Genome-wide survey and analysis of the TIFY gene family and its potential role in anthocyanin synthesis in Chinese sand pear (Pyrus pyrifolia) Tree Genetics & Genomes Yunjing Ma, Shashan Shu, Songling Bai, Ruiyan Tao, Minjie Qian, Yuanwen Teng
2018	The R2R3MYB Gene Family in Phyllostachys edulis: Genome-Wide Analysis and Identification of Stress or Development-Related R2R3MYBs Frontiers in Plant Science Dan Hou, Zhanchao Cheng, Lihua Xie, Xiangyu Li, Juan Li, Shaohua Mu, Jian Gao
2017	Global Gene Expression Analysis Reveals Crosstalk between Response Mechanisms to Cold and Drought Stresses in Cassava Seedlings Frontiers in Plant Science Shuxia Li, Xiang Yu, Zhihao Cheng, Xiaoling Yu, Mengbin Ruan, Wenbin Li, Ming Peng
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