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J Pamela Engelberts, Jun Ye, Donovan H Parks, Eilish S McMaster, Allison S McInnes, Ben J Woodcroft, James G Volmer, Simon J McIlroy, Gene W Tyson

Mélanie Billaud, Dorota Czerucka

Cong Liu, Jian Zhang, Qiqi Li, Yuehuan Zhang, Si Zhang, Ziniu Yu, Jun Li, Jie Li

Ashley M Dungan, Kshitij Tandon, Vanta Jameson, Cecilie Ravn Gotze, Linda L Blackall, Madeleine J H van Oppen

Rosemary Kate Steinberg, John Turnbull, Tracy D. Ainsworth, Katherine A. Dafforn, Alistair G. B. Poore, Emma L. Johnston

P. M. Cardoso, L. J. Hill, H. D. M. Villela, C. L. S. Vilela, J. M. Assis, P. M. Rosado, J. G. Rosado, M. A. Chacon, M. E. Majzoub, G. A. S. Duarte, T. Thomas, R. S. Peixoto

Hideyuki Yamashiro, Naohisa Wada, Sen-Lin Tang

Naohisa Wada, Akira Iguchi, Yuta Urabe, Yuki Yoshioka, Natsumi Abe, Kazuki Takase, Shuji Hayashi, Saeko Kawanabe, Yui Sato, Sen-Lin Tang, Nobuhiro Mano

Aine Hawthorn, Ilze K. Berzins, Michelle M. Dennis, Matti Kiupel, Alisa L. Newton, Esther C. Peters, Vicente A. Reyes, Thierry M. Work

Denise P. Silva, Hannah E. Epstein, Rebecca L. Vega Thurber

Meiting Xu, Keke Cheng, Baohua Xiao, Mengmeng Tong, Zhonghua Cai, Mui-Choo Jong, Guofu Chen, Jin Zhou

Madeleine J. H. van Oppen, Jean‐Baptiste Raina

Rebecca Vega Thurber, Emily R. Schmeltzer, Andréa G. Grottoli, Robert van Woesik, Robert J. Toonen, Mark Warner, Kerri L. Dobson, Rowan H. McLachlan, Katie Barott, Daniel J. Barshis, Justin Baumann, Leila Chapron, David J. Combosch, Adrienne MS Correa, Thomas M. DeCarlo, Mary Hagedorn, Laetitia Hédouin, Kenneth Hoadley, Thomas Felis, Christine Ferrier-Pagès, Carly Kenkel, Ilsa B. Kuffner, Jennifer Matthews, Mónica Medina, Christopher Meyer, Corinna Oster, James Price, Hollie M. Putnam, Yvonne Sawall

Rúben M. Costa, Anny Cárdenas, Céline Loussert-Fonta, Gaëlle Toullec, Anders Meibom, Christian R. Voolstra

Ilze K. Berzins, Roy P. E. Yanong, Elise E.B. LaDouceur, Esther C. Peters

J. Pamela Engelberts, Steven J. Robbins, Katarina Damjanovic, Nicole S. Webster

Kyohei Horio, Hirokazu Takahashi, Toshiro Kobori, Kenshi Watanabe, Tsunehiro Aki, Yutaka Nakashimada, Yoshiko Okamura

Naohisa Wada, Hideaki Yuasa, Rei Kajitani, Yasuhiro Gotoh, Yoshitoshi Ogura, Dai Yoshimura, Atsushi Toyoda, Sen-Lin Tang, Yukihiro Higashimura, Hugh Sweatman, Zac Forsman, Omri Bronstein, Gal Eyal, Nalinee Thongtham, Takehiko Itoh, Tetsuya Hayashi, Nina Yasuda

Katarina Damjanovic, Patricia Menéndez, Linda L. Blackall, Madeleine J. H. van Oppen

Hillary A. Smith, Jessica A. Conlan, F. Joseph Pollock, Naohisa Wada, Amanda Shore, Julia Yun-Hsuan Hung, Greta S. Aeby, Bette L. Willis, David S. Francis, David G. Bourne

Katarina Damjanovic, Madeleine J. H. van Oppen, Patricia Menéndez, Linda L. Blackall

Ira Cooke, Oliver Mead, Casey Whalen, Chloë Boote, Aurelie Moya, Hua Ying, Steven Robbins, Jan M. Strugnell, Aaron Darling, David Miller, Christian R. Voolstra, Maja Adamska

Naohisa Wada, Mizuki Ishimochi, Taeko Matsui, F. Joseph Pollock, Sen-Lin Tang, Tracy D. Ainsworth, Bette L. Willis, Nobuhiro Mano, David G. Bourne

Natsuko Miura, Keisuke Motone, Toshiyuki Takagi, Shunsuke Aburaya, Sho Watanabe, Wataru Aoki, Mitsuyoshi Ueda

Naohisa Wada, Aki Ohdera, Nobuhiro Mano

Hanaka Mera, David G. Bourne

Amy Apprill, Laura G. Weber, Alyson E. Santoro

2025	GenomeFISH: genome-based fluorescence in situ hybridization for strain-level visualization of microbial communities The ISME Journal J Pamela Engelberts, Jun Ye, Donovan H Parks, Eilish S McMaster, Allison S McInnes, Ben J Woodcroft, James G Volmer, Simon J McIlroy, Gene W Tyson
2025	Exploring different methods of Exaiptasia diaphana infection to follow Vibrio parahaemolyticus dissemination in the whole animal BMC Microbiology Mélanie Billaud, Dorota Czerucka
2025	Horizontal transmission of symbiotic bacteria and host selective sweep in the giant clam Tridacna crocea ISME Communications Cong Liu, Jian Zhang, Qiqi Li, Yuehuan Zhang, Si Zhang, Ziniu Yu, Jun Li, Jie Li
2024	A targeted approach to enrich host-associated bacteria for metagenomic sequencing FEMS Microbes Ashley M Dungan, Kshitij Tandon, Vanta Jameson, Cecilie Ravn Gotze, Linda L Blackall, Madeleine J H van Oppen
2024	Impacts of necrotising disease on the Endangered cauliflower soft coral (Dendronephthya australis) Marine and Freshwater Research Rosemary Kate Steinberg, John Turnbull, Tracy D. Ainsworth, Katherine A. Dafforn, Alistair G. B. Poore, Emma L. Johnston
2024	Localization and symbiotic status of probiotics in the coral holobiont mSystems P. M. Cardoso, L. J. Hill, H. D. M. Villela, C. L. S. Vilela, J. M. Assis, P. M. Rosado, J. G. Rosado, M. A. Chacon, M. E. Majzoub, G. A. S. Duarte, T. Thomas, R. S. Peixoto
2023	Coral Reefs of the World Hideyuki Yamashiro, Naohisa Wada, Sen-Lin Tang
2023	Microbial mat compositions and localization patterns explain the virulence of black band disease in corals npj Biofilms and Microbiomes Naohisa Wada, Akira Iguchi, Yuta Urabe, Yuki Yoshioka, Natsumi Abe, Kazuki Takase, Shuji Hayashi, Saeko Kawanabe, Yui Sato, Sen-Lin Tang, Nobuhiro Mano
2023	An introduction to lesions and histology of scleractinian corals Veterinary Pathology Aine Hawthorn, Ilze K. Berzins, Michelle M. Dennis, Matti Kiupel, Alisa L. Newton, Esther C. Peters, Vicente A. Reyes, Thierry M. Work
2023	Best practices for generating and analyzing 16S rRNA amplicon data to track coral microbiome dynamics Frontiers in Microbiology Denise P. Silva, Hannah E. Epstein, Rebecca L. Vega Thurber
2023	Bacterial Communities Vary from Different Scleractinian Coral Species and between Bleached and Non-Bleached Corals Microbiology Spectrum Meiting Xu, Keke Cheng, Baohua Xiao, Mengmeng Tong, Zhonghua Cai, Mui-Choo Jong, Guofu Chen, Jin Zhou
2023	Coral holobiont research needs spatial analyses at the microbial scale Environmental Microbiology Madeleine J. H. van Oppen, Jean‐Baptiste Raina
2022	Unified methods in collecting, preserving, and archiving coral bleaching and restoration specimens to increase sample utility and interdisciplinary collaboration PeerJ Rebecca Vega Thurber, Emily R. Schmeltzer, Andréa G. Grottoli, Robert van Woesik, Robert J. Toonen, Mark Warner, Kerri L. Dobson, Rowan H. McLachlan, Katie Barott, Daniel J. Barshis, Justin Baumann, Leila Chapron, David J. Combosch, Adrienne MS Correa, Thomas M. DeCarlo, Mary Hagedorn, Laetitia Hédouin, Kenneth Hoadley, Thomas Felis, Christine Ferrier-Pagès, Carly Kenkel, Ilsa B. Kuffner, Jennifer Matthews, Mónica Medina, Christopher Meyer, Corinna Oster, James Price, Hollie M. Putnam, Yvonne Sawall
2021	Surface Topography, Bacterial Carrying Capacity, and the Prospect of Microbiome Manipulation in the Sea Anemone Coral Model Aiptasia Frontiers in Microbiology Rúben M. Costa, Anny Cárdenas, Céline Loussert-Fonta, Gaëlle Toullec, Anders Meibom, Christian R. Voolstra
2021	Invertebrate Histology Ilze K. Berzins, Roy P. E. Yanong, Elise E.B. LaDouceur, Esther C. Peters
2021	Integrating novel tools to elucidate the metabolic basis of microbial symbiosis in reef holobionts Marine Biology J. Pamela Engelberts, Steven J. Robbins, Katarina Damjanovic, Nicole S. Webster
2021	Visualization of Gene Reciprocity among Lactic Acid Bacteria in Yogurt by RNase H-Assisted Rolling Circle Amplification-Fluorescence In Situ Hybridization Microorganisms Kyohei Horio, Hirokazu Takahashi, Toshiro Kobori, Kenshi Watanabe, Tsunehiro Aki, Yutaka Nakashimada, Yoshiko Okamura
2020	A ubiquitous subcuticular bacterial symbiont of a coral predator, the crown-of-thorns starfish, in the Indo-Pacific Microbiome Naohisa Wada, Hideaki Yuasa, Rei Kajitani, Yasuhiro Gotoh, Yoshitoshi Ogura, Dai Yoshimura, Atsushi Toyoda, Sen-Lin Tang, Yukihiro Higashimura, Hugh Sweatman, Zac Forsman, Omri Bronstein, Gal Eyal, Nalinee Thongtham, Takehiko Itoh, Tetsuya Hayashi, Nina Yasuda
2020	Mixed‐mode bacterial transmission in the common brooding coralPocillopora acuta Environmental Microbiology Katarina Damjanovic, Patricia Menéndez, Linda L. Blackall, Madeleine J. H. van Oppen
2020	Early Life Stages of a Common Broadcast Spawning Coral Associate with Specific Bacterial Communities Despite Lack of Internalized Bacteria Microbial Ecology Katarina Damjanovic, Patricia Menéndez, Linda L. Blackall, Madeleine J. H. van Oppen
2020	Energy depletion and opportunistic microbial colonisation in white syndrome lesions from corals across the Indo-Pacific Scientific Reports Hillary A. Smith, Jessica A. Conlan, F. Joseph Pollock, Naohisa Wada, Amanda Shore, Julia Yun-Hsuan Hung, Greta S. Aeby, Bette L. Willis, David S. Francis, David G. Bourne
2019	Experimental Inoculation of Coral Recruits With Marine Bacteria Indicates Scope for Microbiome Manipulation in Acropora tenuis and Platygyra daedalea Frontiers in Microbiology Katarina Damjanovic, Madeleine J. H. van Oppen, Patricia Menéndez, Linda L. Blackall
2019	Molecular techniques and their limitations shape our view of the holobiont Zoology Ira Cooke, Oliver Mead, Casey Whalen, Chloë Boote, Aurelie Moya, Hua Ying, Steven Robbins, Jan M. Strugnell, Aaron Darling, David Miller, Christian R. Voolstra, Maja Adamska
2019	Characterization of coral-associated microbial aggregates (CAMAs) within tissues of the coral Acropora hyacinthus Scientific Reports Naohisa Wada, Mizuki Ishimochi, Taeko Matsui, F. Joseph Pollock, Sen-Lin Tang, Tracy D. Ainsworth, Bette L. Willis, Nobuhiro Mano, David G. Bourne
2019	Ruegeria sp. Strains Isolated from the Reef-Building Coral Galaxea fascicularis Inhibit Growth of the Temperature-Dependent Pathogen Vibrio coralliilyticus Marine Biotechnology Natsuko Miura, Keisuke Motone, Toshiyuki Takagi, Shunsuke Aburaya, Sho Watanabe, Wataru Aoki, Mitsuyoshi Ueda
2018	Coral Reefs of the World Naohisa Wada, Aki Ohdera, Nobuhiro Mano
2018	Disentangling causation: complex roles of coral‐associated microorganisms in disease Environmental Microbiology Hanaka Mera, David G. Bourne
2017	Marine Animal Microbiomes: Toward Understanding Host–Microbiome Interactions in a Changing Ocean Frontiers in Marine Science Amy Apprill
2016	Distinguishing between Microbial Habitats Unravels Ecological Complexity in Coral Microbiomes mSystems Amy Apprill, Laura G. Weber, Alyson E. Santoro
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