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2025	Leveraging ddRADseq for Uncovering New Genome-Wide and Polymorphic SSR Markers in Japanese Plum (Prunus salicina Lindl.) Plant Molecular Biology Reporter C. V. Acuña, N. C. Aguirre, C. V. Filippi, M. N. García, J. G. Rivas, P. V. Villalba, A. V. Gutiérrez, M. C. Martínez, T. Cerrillo, G. H. Valentini, G. Sánchez, H. E. Hopp, S. N. Marcucci Poltri
2025	Association analysis of the molecular characteristics and floral traits of Iris × germanica Czech Journal of Genetics and Plant Breeding Feng Tian, Ya Tian, Fang Yu, Jinsen Qian, Feijian Wang, Xue Li, Tongyin Li, Xiaofei Zhang, Dazhuang Huang, Xiaojie Zhao
2023	Development and Application of EST-SSR Markers Related to Lead Stress Responses in Kenaf Based on Transcriptome Sequencing Data Sustainability Xia An, Xiahong Luo, Wenlue Li, Tingting Liu, Lina Zou
2023	Exogenous applications of gibberellic acid modulate the growth, flowering and longevity of calla lily Heliyon Anjali Chandel, Meenakshi Thakur, Anjali Rakwal, Seema Chauhan, Bhavya Bhargava
2023	Molecular Marker Techniques Tania Sagar, Nisha Kapoor, Ritu Mahajan
2023	Develop a preliminary core germplasm with the novel polymorphism EST-SSRs derived from three transcriptomes of colored calla lily (Zantedeschia hybrida) Frontiers in Plant Science Yi Wang, Tuo Yang, Xue Wang, Xuan Sun, Hongyan Liu, Di Wang, Huanxiao Wang, Guojun Zhang, Yanbing Li, Xian Wang, Zunzheng Wei
2022	Pantranscriptome combined with phenotypic quantification reveals germplasm kinship and regulation network of bract color variation in Bougainvillea Frontiers in Plant Science Huaxing Huang, Hongli Ji, Song Ju, Wei Lin, Jing Li, Xuanrui Lv, Lixian Lin, Lijin Guo, Dongliang Qiu, Jianyong Yan, Xiaokai Ma
2022	EST-SSR Markers’ Development Based on RNA-Sequencing and Their Application in Population Genetic Structure and Diversity Analysis of Eleusine indica in China Current Issues in Molecular Biology Jingchao Chen, Hailan Cui, Hongjuan Huang, Shouhui Wei, Yan Liu, Haiyan Yu, Yan Ma, Xiangju Li, Xiaoyan Ma
2022	Transcriptome Analysis and Identification of a Female-Specific SSR Marker in Pistacia chinensis Based on Illumina Paired-End RNA Sequencing Genes Xiaomao Cheng, Fei Wang, Wen Luo, Jingge Kuang, Xiaoxia Huang
2022	De novo transcriptome assembly, gene annotation, and EST-SSR marker development of an important medicinal and edible crop, Amomum tsaoko (Zingiberaceae) BMC Plant Biology Mengli Ma, Hengling Meng, En Lei, Tiantao Wang, Wei Zhang, Bingyue Lu
2022	De novo transcriptome assembly using Illumina sequencing and development of EST-SSR markers in a monoecious herb Sagittaria trifolia Linn PeerJ Hanqing Tang, Josphat K. Saina, Zhi-Cheng Long, Jinming Chen, Can Dai
2021	Mechanism Underlying Color Variation in Calla Lily Spathes Based on Transcriptomic Analysis Journal of the American Society for Horticultural Science Ying Fang, Ting Lei, Yanmei Wu, Xuehua Jin
2021	Characterization of EST-SSR markers in Curcuma kwangsiensis S. K. Lee & C. F. Liang based on RNA sequencing and its application for phylogenetic relationship analysis and core collection construction Genetic Resources and Crop Evolution Yuanjun Ye, Yechun Xu, Dongmei Li, Jianjun Tan, Jinmei Liu
2021	GENETIC ANALYSIS OF 38 DOUBLE-FLOWERED AMARYLLIS (Hippeastrum hybridum) CULTIVARS BASED ON SRAP MARKERS Acta Scientiarum Polonorum Hortorum Cultus Min Xiong, Shuai Yang, Yi Wang, Defeng Chen, Xian Wang, Di Zhou, Zunzheng Wei
2021	Development of EST-SSR markers based on transcriptome and its validation in ginger (Zingiber officinale Rosc.) PLOS ONE Venugopal Vidya, Duraisamy Prasath, Mohandas Snigdha, Ramasamy Gobu, Charles Sona, Chandan Suravi Maiti
2021	Transcriptome based high-throughput SSRs and SNPs discovery in the medicinal plant Lagenaria siceraria BIOCELL HONGYUAN ZHANG, MIN ZHANG, JIE TAN, SHUPING HUANG, GUOLIN ZHOU, XIA CHEN
2020	De novo Transcriptome Assembly, Gene Annotation and SSR Marker Development in the Moon Seed Genus Menispermum (Menispermaceae) Frontiers in Genetics Faiza Hina, Gulbar Yisilam, Shenyi Wang, Pan Li, Chengxin Fu
2020	Genetic Divergence and Relationship Among Opisthopappus Species Identified by Development of EST-SSR Markers Frontiers in Genetics Min Chai, Hang Ye, Zhi Wang, Yuancheng Zhou, Jiahui Wu, Yue Gao, Wei Han, En Zang, Hao Zhang, Wenming Ru, Genlou Sun, Yling Wang
2020	Assessment of genetic diversity and identification of core germplasm in single-flowered amaryllis (Hippeastrum hybridum) using SRAP markers Biotechnology & Biotechnological Equipment Min Xiong, Yi Wang, Defeng Chen, Xian Wang, Di Zhou, Zunzheng Wei
2019	De Novo Assembled Transcriptome Analysis and Identification of Genic SSR Markers in Red-Flowered Strawberry Biochemical Genetics Yan Ding, Li Xue, Rui-xue Guo, Gang-jun Luo, Yu-tong Song, Jia-jun Lei
2019	De novo assembly of transcriptomes, mining, and development of novel EST-SSR markers in Curcuma alismatifolia (Zingiberaceae family) through Illumina sequencing Scientific Reports Sima Taheri, Thohirah Lee Abdullah, M. Y. Rafii, Jennifer Ann Harikrishna, Stefaan P. O. Werbrouck, Chee How Teo, Mahbod Sahebi, Parisa Azizi
2019	Development of EST-based SSR and SNP markers in Gastrodia elata (herbal medicine) by sequencing, de novo assembly and annotation of the transcriptome 3 Biotech Yunsheng Wang, Muhammad Qasim Shahid, Fozia Ghouri, Sezai Ercişli, Faheem Shehzad Baloch
2018	Handbook of Plant Breeding Heiko Mibus
2018	Recent progress in whole genome sequencing, high-density linkage maps, and genomic databases of ornamental plants Breeding Science Masafumi Yagi
2018	Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants Molecules Sima Taheri, Thohirah Lee Abdullah, Mohd Yusop, Mohamed Hanafi, Mahbod Sahebi, Parisa Azizi, Redmond Shamshiri
2018	Handbook of Plant Breeding Marinus J. M. Smulders, Paul Arens
2018	Revealing the complex genetic structure of cultivated amaryllis (Hippeastrum hybridum) using transcriptome-derived microsatellite markers Scientific Reports Yi Wang, Defeng Chen, Xiaofeng He, Jiangxian Shen, Min Xiong, Xian Wang, Di Zhou, Zunzheng Wei
2018	De novo sequencing of the Freesia hybrida petal transcriptome to discover putative anthocyanin biosynthetic genes and develop EST–SSR markers Acta Physiologiae Plantarum Dong-Qin Tang, Yi Sun, Xi Li, Zi Yan, Yi-Min Shi
2017	Assessing Genetic Diversity and Population Differentiation of Colored Calla Lily (Zantedeschia Hybrid) for an Efficient Breeding Program Genes Zunzheng Wei, Huali Zhang, Yi Wang, Youli Li, Min Xiong, Xian Wang, Di Zhou
2017	De novo transcriptome assembly of Zanthoxylum bungeanum using Illumina sequencing for evolutionary analysis and simple sequence repeat marker development Scientific Reports Shijing Feng, Lili Zhao, Zhenshan Liu, Yulin Liu, Tuxi Yang, Anzhi Wei
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