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2025
Temporal control of progenitor competence shapes maturation in GABAergic neuron development in mice
Nature Neuroscience
2024
Transcription factor co-expression mediates lineage priming for embryonic and extra-embryonic differentiation
Stem Cell Reports
2024
PAM-flexible Engineered FnCas9 variants for robust and ultra-precise genome editing and diagnostics
Nature Communications
2024
The Aryl Hydrocarbon Receptor Regulates Epidermal Differentiation through Transient Activation of TFAP2A
Journal of Investigative Dermatology
2023
Spic regulates one-carbon metabolism and histone methylation in ground-state pluripotency
Science Advances
2023
An integrated genomic approach identifies follistatin as a target of the p63-epidermal growth factor receptor oncogenic network in head and neck squamous cell carcinoma
NAR Cancer
2023
ChroKit: a Shiny-based framework for interactive analysis, visualization and integration of genomic data
Nucleic Acids Research
2023
Dissecting the role of SWI/SNF component ARID1B in steady-state hematopoiesis
Blood Advances
2023
Chromatin profiling identifies transcriptional readthrough as a conserved mechanism for piRNA biogenesis in mosquitoes
Cell Reports
2023
In Vivo Genome-Wide PGR Binding in Pregnant Human Myometrium Identifies Potential Regulators of Labor
Reproductive Sciences
2023
Acid ceramidase regulates innate immune memory
Cell Reports
2022
Direct targeted therapy for MLL‐fusion‐driven high‐risk acute leukaemias
Clinical and Translational Medicine
2022
H3K4me3 plays a key role in establishing permissive chromatin states during bud dormancy and bud break in apple
The Plant Journal
2022
Screening thousands of transcribed coding and non-coding regions reveals sequence determinants of RNA polymerase II elongation potential
Nature Structural & Molecular Biology
2021
Loss of PRC2 subunits primes lineage choice during exit of pluripotency
Nature Communications
2021
Stronger induction of trained immunity by mucosal BCG or MTBVAC vaccination compared to standard intradermal vaccination
Cell Reports Medicine
2021
recoup: flexible and versatile signal visualization from next generation sequencing
BMC Bioinformatics
2021
Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates
The EMBO Journal
2021
Interpretation of allele-specific chromatin accessibility using cell state–aware deep learning
Genome Research
2021
Off-the-shelf proximity biotinylation for interaction proteomics
Nature Communications
2021
Selective Requirement of MYB for Oncogenic Hyperactivation of a Translocated Enhancer in Leukemia
Cancer Discovery
2020
The corepressor NCOR1 and OCT4 facilitate early reprogramming by suppressing fibroblast gene expression
PeerJ
2020
Systematic alteration of ATAC-seq for profiling open chromatin in cryopreserved nuclei preparations from livestock tissues
Scientific Reports
2019
Extensive epigenomic integration of the glucocorticoid response in primary human monocytes and in vitro derived macrophages
Scientific Reports
2019
Mutational patterns and regulatory networks in epigenetic subgroups of meningioma
Acta Neuropathologica
2019
Chromatin remodeling mediated by ARID1A is indispensable for normal hematopoiesis in mice
Leukemia
2019
svist4get: a simple visualization tool for genomic tracks from sequencing experiments
BMC Bioinformatics
2019
Protein quality control in the nucleolus safeguards recovery of epigenetic regulators after heat shock
eLife
2019
Loss of the Polycomb group protein Rnf2 results in derepression of tbx-transcription factors and defects in embryonic and cardiac development
Scientific Reports
2019
Molecular dissection of the oncogenic role of ETS1 in the mesenchymal subtypes of head and neck squamous cell carcinoma
PLOS Genetics
2019
The Leukemogenic TCF3-HLF Complex Rewires Enhancers Driving Cellular Identity and Self-Renewal Conferring EP300 Vulnerability
Cancer Cell
2019
Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency
Nature Cell Biology
2018
Dendritic Cells Actively Limit Interleukin-10 Production Under Inflammatory Conditions via DC-SCRIPT and Dual-Specificity Phosphatase 4
Frontiers in Immunology
2018
ZBTB 2 reads unmethylated CpG island promoters and regulates embryonic stem cell differentiation
EMBO reports
2018
MTF2 recruits Polycomb Repressive Complex 2 by helical-shape-selective DNA binding
Nature Genetics
2018
Mutant p63 Affects Epidermal Cell Identity through Rewiring the Enhancer Landscape
Cell Reports
2018
Genetic and Epigenetic Regulation of Zebrafish Intestinal Development
Epigenomes
2018
NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells
Nature Communications
2018
Chromatin Accessibility-Based Characterization of the Gene Regulatory Network Underlying Plasmodium falciparum Blood-Stage Development
Cell Host & Microbe
2017
Genomic organization and modulation of gene expression of the TGF-β and FGF pathways in the allotetraploid frog Xenopus laevis
Developmental Biology
2017
Regulatory remodeling in the allo-tetraploid frog Xenopus laevis
Genome Biology
2017
H2A.Z Represses Gene Expression by Modulating Promoter Nucleosome Structure and Enhancer Histone Modifications in Arabidopsis
Molecular Plant
2016
ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage
Cell Reports
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