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Daniel Andersson, Firaol Tamiru Kebede, Mandy Escobar, Tobias Österlund, Anders Ståhlberg

Xudong Xiang, Bowen Lu, Dongyang Song, Jie Li, Kunxian Shu, Dan Pu

Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Élise Prieur-Gaston, Élodie Bohers, Mathieu Viennot, Philippe Ruminy, Hélène Dauchel, Pierre Vera, Fabrice Jardin

Sander N Goossens, Tim H Heupink, Elise De Vos, Anzaan Dippenaar, Margaretha De Vos, Rob Warren, Annelies Van Rie

Tobias Österlund, Stefan Filges, Gustav Johansson, Anders Ståhlberg

Abdul Rezzak Hamzeh, T. Daniel Andrews, Matt A. Field

August E. Woerner, Sammed Mandape, Jonathan L. King, Melissa Muenzler, Benjamin Crysup, Bruce Budowle

Nusrat J. Epsi, Sukanya Panja, Antonina Mitrofanova

Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Élise Prieur-Gaston, Élodie Bohers, Mathieu Viennot, Philippe Ruminy, Hélène Dauchel, Pierre Vera, Fabrice Jardin

Mandeep Singh, Katherine J.L. Jackson, Jing J. Wang, Peter Schofield, Matt A. Field, David Koppstein, Timothy J. Peters, Deborah L. Burnett, Simone Rizzetto, Damien Nevoltris, Etienne Masle-Farquhar, Megan L. Faulks, Amanda Russell, Divya Gokal, Asami Hanioka, Keisuke Horikawa, Alexander D. Colella, Timothy K. Chataway, James Blackburn, Tim R. Mercer, David B. Langley, D. Margaret Goodall, Roy Jefferis, Muralikrishna Gangadharan Komala, Anthony D. Kelleher, Dan Suan, Maureen Rischmueller, Daniel Christ, Robert Brink, Fabio Luciani, Tom P. Gordon, Christopher C. Goodnow, Joanne H. Reed

Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Philippe Ruminy, Caroline Bérard, Élise Prieur-Gaston, Fabrice Jardin

Zachary S. Bohannan, Antonina Mitrofanova

Chang Xu, Xiujing Gu, Raghavendra Padmanabhan, Zhong Wu, Quan Peng, John DiCarlo, Yexun Wang

Thibaud Koessler, Alfredo Addeo, Thierry Nouspikel

Maram Shouman, Nahla Belal, Yasser El Sonbaty

2024	Principles of digital sequencing using unique molecular identifiers Molecular Aspects of Medicine Daniel Andersson, Firaol Tamiru Kebede, Mandy Escobar, Tobias Österlund, Anders Ståhlberg
2023	Evaluating the performance of low-frequency variant calling tools for the detection of variants from short-read deep sequencing data Scientific Reports Xudong Xiang, Bowen Lu, Dongyang Song, Jie Li, Kunxian Shu, Dan Pu
2022	Methods in Molecular Biology Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Élise Prieur-Gaston, Élodie Bohers, Mathieu Viennot, Philippe Ruminy, Hélène Dauchel, Pierre Vera, Fabrice Jardin
2022	Detection of minor variants in Mycobacterium tuberculosis whole genome sequencing data Briefings in Bioinformatics Sander N Goossens, Tim H Heupink, Elise De Vos, Anzaan Dippenaar, Margaretha De Vos, Rob Warren, Annelies Van Rie
2022	UMIErrorCorrect and UMIAnalyzer: Software for Consensus Read Generation, Error Correction, and Visualization Using Unique Molecular Identifiers Clinical Chemistry Tobias Österlund, Stefan Filges, Gustav Johansson, Anders Ståhlberg
2021	Methods in Molecular Biology Abdul Rezzak Hamzeh, T. Daniel Andrews, Matt A. Field
2021	Reducing noise and stutter in short tandem repeat loci with unique molecular identifiers Forensic Science International: Genetics August E. Woerner, Sammed Mandape, Jonathan L. King, Melissa Muenzler, Benjamin Crysup, Bruce Budowle
2021	Detecting pathogenic variants in autoimmune diseases using high‐throughput sequencing Immunology & Cell Biology Matt A Field
2020	Detection Methods in Precision Medicine Nusrat J. Epsi, Sukanya Panja, Antonina Mitrofanova
2020	UMI-VarCal: a new UMI-based variant caller that efficiently improves low-frequency variant detection in paired-end sequencing NGS libraries Bioinformatics Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Élise Prieur-Gaston, Élodie Bohers, Mathieu Viennot, Philippe Ruminy, Hélène Dauchel, Pierre Vera, Fabrice Jardin
2020	Lymphoma Driver Mutations in the Pathogenic Evolution of an Iconic Human Autoantibody Cell Mandeep Singh, Katherine J.L. Jackson, Jing J. Wang, Peter Schofield, Matt A. Field, David Koppstein, Timothy J. Peters, Deborah L. Burnett, Simone Rizzetto, Damien Nevoltris, Etienne Masle-Farquhar, Megan L. Faulks, Amanda Russell, Divya Gokal, Asami Hanioka, Keisuke Horikawa, Alexander D. Colella, Timothy K. Chataway, James Blackburn, Tim R. Mercer, David B. Langley, D. Margaret Goodall, Roy Jefferis, Muralikrishna Gangadharan Komala, Anthony D. Kelleher, Dan Suan, Maureen Rischmueller, Daniel Christ, Robert Brink, Fabio Luciani, Tom P. Gordon, Christopher C. Goodnow, Joanne H. Reed
2020	UMI-Gen: A UMI-based read simulator for variant calling evaluation in paired-end sequencing NGS libraries Computational and Structural Biotechnology Journal Vincent Sater, Pierre-Julien Viailly, Thierry Lecroq, Philippe Ruminy, Caroline Bérard, Élise Prieur-Gaston, Fabrice Jardin
2019	Calling Variants in the Clinic: Informed Variant Calling Decisions Based on Biological, Clinical, and Laboratory Variables Computational and Structural Biotechnology Journal Zachary S. Bohannan, Antonina Mitrofanova
2019	smCounter2: an accurate low-frequency variant caller for targeted sequencing data with unique molecular identifiers Bioinformatics Chang Xu, Xiujing Gu, Raghavendra Padmanabhan, Zhong Wu, Quan Peng, John DiCarlo, Yexun Wang
2019	Advances in Clinical Chemistry Thibaud Koessler, Alfredo Addeo, Thierry Nouspikel
2018	A review of somatic single nucleotide variant calling algorithms for next-generation sequencing data Computational and Structural Biotechnology Journal Chang Xu
2018	Lecture Notes in Computer Science Maram Shouman, Nahla Belal, Yasser El Sonbaty
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