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2024	Coordinated transcriptional response to environmental stress by a Synechococcus virus The ISME Journal Branko Rihtman, Alberto Torcello-Requena, Alevtina Mikhaylina, Richard J Puxty, Martha R J Clokie, Andrew D Millard, David J Scanlan
2024	The long and short of it: benchmarking viromics using Illumina, Nanopore and PacBio sequencing technologies Microbial Genomics Ryan Cook, Nathan Brown, Branko Rihtman, Slawomir Michniewski, Tamsin Redgwell, Martha Clokie, Dov J. Stekel, Yin Chen, David J. Scanlan, Jon L. Hobman, Andrew Nelson, Michael A. Jones, Darren Smith, Andrew Millard
2023	Genome Sequence and Characterization of Coliphage Môr Ffagbaw PHAGE Nerissa E. Thomas, Nzubechukwu Innocent Ugokwe, Andrew Kinsella, Edouard Galyov, Willem van Schaik, Naomi Joyce, Franklin L. Nobrega, Andrew Millard, Rachael C. Wilkinson
2023	Genomic analysis of Anderson typing phages of Salmonella Typhimrium: towards understanding the basis of bacteria-phage interaction Scientific Reports Manal Mohammed, Sherwood R. Casjens, Andrew D. Millard, Christian Harrison, Lucy Gannon, Marie Anne Chattaway
2022	Isolation and characterization of E. coli O157: H7 novel bacteriophage for controlling this food-borne pathogen Virus Research Parisa Mozaffari, Enayat Berizi, Saeid Hosseinzadeh, Zahra Derakhshan, Vahideh Taghadosi, Zahra Montaseri, Friedrich Götz
2022	Crop management shapes the diversity and activity of DNA and RNA viruses in the rhizosphere Microbiome George Muscatt, Sally Hilton, Sebastien Raguideau, Graham Teakle, Ian D. E. A. Lidbury, Elizabeth M. H. Wellington, Christopher Quince, Andrew Millard, Gary D. Bending, Eleanor Jameson
2021	Bacteriophages Siân V. Owen, Blanca M. Perez-Sepulveda, Evelien M. Adriaenssens
2021	Fishing for phages in metagenomes: what do we catch, what do we miss? Current Opinion in Virology Sean Benler, Eugene V Koonin
2021	Phage Genome Annotation: Where to Begin and End PHAGE Anastasiya Shen, Andrew Millard
2021	INfrastructure for a PHAge REference Database: Identification of Large-Scale Biases in the Current Collection of Cultured Phage Genomes PHAGE Ryan Cook, Nathan Brown, Tamsin Redgwell, Branko Rihtman, Megan Barnes, Martha Clokie, Dov J. Stekel, Jon Hobman, Michael A. Jones, Andrew Millard
2021	Phage Annotation Guide: Guidelines for Assembly and High-Quality Annotation PHAGE Dann Turner, Evelien M. Adriaenssens, Igor Tolstoy, Andrew M. Kropinski
2021	Bacteriophages in Biological Wastewater Treatment Systems: Occurrence, Characterization, and Function Frontiers in Microbiology Viviane Runa, Jannis Wenk, Simon Bengtsson, Brian V. Jones, Ana B. Lanham
2021	A new family of globally distributed lytic roseophages with unusual deoxythymidine to deoxyuridine substitution Current Biology Branko Rihtman, Richard J. Puxty, Alexia Hapeshi, Yan-Jiun Lee, Yuanchao Zhan, Slawomir Michniewski, Nicholas R. Waterfield, Feng Chen, Peter Weigele, Andrew D. Millard, David J. Scanlan, Yin Chen
2020	Genome Sequence and Characterization of Coliphage vB_Eco_SLUR29 PHAGE Ibrahim Besler, Pavelas Sazinas, Christian Harrison, Lucy Gannon, Tamsin Redgwell, Slawomir Michniewski, Steven P. Hooton, Jon L. Hobman, Andrew Millard
2020	The Isolation and Genome Sequencing of Five Novel Bacteriophages From the Rumen Active Against Butyrivibrio fibrisolvens Frontiers in Microbiology Jessica C. A. Friedersdorff, Alison H. Kingston-Smith, Justin A. Pachebat, Alan R. Cookson, David Rooke, Christopher J. Creevey
2020	Comparison of CRISPR and Marker-Based Methods for the Engineering of Phage T7 Viruses Aurelija M. Grigonyte, Christian Harrison, Paul R. MacDonald, Ariadna Montero-Blay, Matthew Tridgett, John Duncan, Antonia P. Sagona, Chrystala Constantinidou, Alfonso Jaramillo, Andrew Millard
2019	Riding the wave of genomics to investigate aquatic coliphage diversity and activity Environmental Microbiology Slawomir Michniewski, Tamsin Redgwell, Aurelija Grigonyte, Branko Rihtman, Maria Aguilo‐Ferretjans, Joseph Christie‐Oleza, Eleanor Jameson, David J. Scanlan, Andrew D. Millard
2019	virMine: automated detection of viral sequences from complex metagenomic samples PeerJ Andrea Garretto, Thomas Hatzopoulos, Catherine Putonti
2019	Metagenomics of the Viral Community in Three Cattle Slurry Samples Microbiology Resource Announcements Pavelas Sazinas, Slawomir Michniewski, Branko Rihtman, Tamsin Redgwell, Aurelija Grigonyte, Amelia Brett, Bethany Guck, Rebecca Smith, Steven P. Hooton, Jon L. Hobman, Andrew D. Millard
2019	The future of phage clinical trials in Australia Microbiology Australia Keith Potent
2019	Bacteriophages Siân V. Owen, Blanca M. Perez-Sepulveda, Evelien M. Adriaenssens
2019	DETERMINATION OF MALIGNANT MELANOMA BY ANALYSIS OF VARIATION VALUES Turkish Journal of Engineering Ahmet Kürşat ESİM, Hilal Kaya, Veysel Alcan
2018	Methods in Molecular Biology Catherine Putonti, Zoë Diener, Siobhan C. Watkins
2018	Comparative Genomics of Bacteriophage of the Genus Seuratvirus Genome Biology and Evolution Pavelas Sazinas, Tamsin Redgwell, Branko Rihtman, Aurelija Grigonyte, Slawomir Michniewski, David J Scanlan, Jon Hobman, Andrew Millard
2018	Phage Genetic Engineering Using CRISPR–Cas Systems Viruses Asma Hatoum-Aslan
2018	Characterizing Phage Genomes for Therapeutic Applications Viruses Casandra Philipson, Logan Voegtly, Matthew Lueder, Kyle Long, Gregory Rice, Kenneth Frey, Biswajit Biswas, Regina Cer, Theron Hamilton, Kimberly Bishop-Lilly
2018	Draft Genome Sequence of Escherichia Phage PGN829.1, Active against Highly Drug-Resistant Uropathogenic Escherichia coli Microbiology Resource Announcements Naveen Chaudhary, Balvinder Mohan, Neelam Taneja
2017	PhageTerm: a tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data Scientific Reports Julian R. Garneau, Florence Depardieu, Louis-Charles Fortier, David Bikard, Marc Monot
2017	Draft Genome Sequence of Bacteriophage vB_Eco_swan01 Genome Announcements Slawomir Michniewski, Tamsin Redgwell, David J. Scanlan, Andrew D. Millard
2016	Draft Genome Sequence of the Bacteriophage vB_Eco_slurp01 Genome Announcements Pavelas Sazinas, Carrie Smith, Aqilah Suhaimi, Jon L. Hobman, Christine E. R. Dodd, Andrew D. Millard
2016	Marine phage genomics: the tip of the iceberg FEMS Microbiology Letters Blanca Perez Sepulveda, Tamsin Redgwell, Branko Rihtman, Frances Pitt, David J. Scanlan, Andrew Millard
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