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2025
Beneath the surface: Unsolved questions in soil virus ecology
Soil Biology and Biochemistry
2025
Optimization of Soil Virus Enrichment Method in Alpine Meadows of the Qinghai-Tibet Plateau
Research on Eco-Environmental Damage
2025
Viromics approaches for the study of viral diversity and ecology in microbiomes
Nature Reviews Genetics
2024
Studying soil viral ecology under an ecosystem services framework
Applied Soil Ecology
2024
Effects of experimentally elevated virus abundance on soil carbon cycling across varying ecosystem types
Soil Biology and Biochemistry
2024
Benchmarking bioinformatic virus identification tools using real-world metagenomic data across biomes
Genome Biology
2024
Soil nutrient conditions alter viral lifestyle strategy and potential function in phosphorous and nitrogen metabolisms
Soil Biology and Biochemistry
2024
Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
Environmental Microbiology
2024
Viral potential to modulate microbial methane metabolism varies by habitat
Nature Communications
2024
Methods in Molecular Biology
2024
Disease suppression in plants: A perspective on the impact of phage-directed soil fertilization in enhancing soil health and sustainability
Biological Control
2024
Exploring viral particle, soil, and extraction buffer physicochemical characteristics and their impacts on extractable viral communities
Soil Biology and Biochemistry
2023
Extraction optimisation to measure viral abundance in red soils
Biology and Fertility of Soils
2023
Zea mays genotype influences microbial and viral rhizobiome community structure
ISME Communications
2023
Meeting report: The first soil viral workshop 2022
Virus Research
2023
A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil
Nature Communications
2022
An Appraisal of Bacteriophage Isolation Techniques from Environment
Microbial Ecology
2022
Ecological Studies
2022
Diversity in the soil virosphere: to infinity and beyond?
Trends in Microbiology
2022
Distribution Characteristics of Soil Viruses Under Different Precipitation Gradients on the Qinghai-Tibet Plateau
Frontiers in Microbiology
2022
Ecogenomics reveals viral communities across the Challenger Deep oceanic trench
Communications Biology
2022
RNA-viromics reveals diverse communities of soil RNA viruses with the potential to affect grassland ecosystems across multiple trophic levels
ISME Communications
2021
Integrating Viral Metagenomics into an Ecological Framework
Annual Review of Virology
2021
Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations
Microbiome
2021
DNA Viral Diversity, Abundance, and Functional Potential Vary across Grassland Soils with a Range of Historical Moisture Regimes
mBio
2021
DNase Treatment Improves Viral Enrichment in Agricultural Soil Viromes
mSystems
2021
Viromes outperform total metagenomes in revealing the spatiotemporal patterns of agricultural soil viral communities
The ISME Journal
2021
Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities
mSystems
2020
The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research
PeerJ
2020
Uncovering a hidden diversity: optimized protocols for the extraction of dsDNA bacteriophages from soil
Microbiome
2020
Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
Soil Systems
2020
Minireview: The role of viruses in marine photosynthetic biofilms
Marine Life Science & Technology
2020
VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences
Microbiome
2019
Benchmarking protocols for the metagenomic analysis of stream biofilm viromes
PeerJ
2019
Optimizing de novo genome assembly from PCR-amplified metagenomes
PeerJ
2019
Soil Aggregate Microbial Communities: Towards Understanding Microbiome Interactions at Biologically Relevant Scales
Applied and Environmental Microbiology
2019
Global Virology III: Virology in the 21st Century
2019
Phages for Phage Therapy: Isolation, Characterization, and Host Range Breadth
Pharmaceuticals
2019
An Improved Method for Extracting Viruses From Sediment: Detection of Far More Viruses in the Subseafloor Than Previously Reported
Frontiers in Microbiology
2019
Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
PeerJ
2018
Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing
mSystems
2018
Host-linked soil viral ecology along a permafrost thaw gradient
Nature Microbiology
2018
The ‘Neglected’ Soil Virome – Potential Role and Impact
Trends in Microbiology
2017
Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD)
Frontiers in Microbiology
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