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2024
DNA barcoding of the supergiant isopods from Bathynomus kensleyi Lowry & Dempsey, 2006 (Cirolanidae) and a molecular biology comparison of B. jamesi Kou, Chen & Li, 2017
Biodiversity Data Journal
2024
The monsoon-associated equine South African pointy mosquito ‘Aedes caballus’; the first comprehensive record from southeastern Iran with a description of ecological, morphological, and molecular aspects
PLOS ONE
2024
Environmental DNA metabarcoding on aquatic insects: Comparing the primer sets of MtInsects‐16S based on the mtDNA 16S and general marker based on the mtDNA COI region
Environmental DNA
2024
eDNA for monitoring and conserving terrestrial arthropods: Insights from a systematic map and barcode repositories assessments
Insect Conservation and Diversity
2024
Metabarcoding: opportunities for accelerating monitoring and understanding insect tropical biodiversity
Journal of Insect Conservation
2024
Genetic insights, assessment of ecological niche and projected distribution changes of the mountain mayfly species Andesiops peruvianus under climate change in the andes
Journal of Insect Conservation
2024
Use of eDNA and conventional sampling methods to survey rock pool (gnamma) biodiversity on granite inselbergs
Austral Ecology
2024
Three steps towards comparability and standardization among molecular methods for characterizing insect communities
Philosophical Transactions of the Royal Society B: Biological Sciences
2024
DNA metabarcoding of light trap samples vs. morphological species identification
Ecological Entomology
2024
Disentangling omnivory of heteropteran and coccinellid predators present in peach and alfalfa crops by metabarcoding analysis
Biological Control
2024
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses
Molecular Ecology Resources
2024
Diet of the critically endangered blackchin guitarfish Glaucostegus cemiculus revealed using DNA metabarcoding
Journal of Fish Biology
2024
Therapeutic avenues in bone repair: Harnessing an anabolic osteopeptide, PEPITEM, to boost bone growth and prevent bone loss
Cell Reports Medicine
2024
Novel foods, old issues: Metabarcoding revealed mislabeling in insect-based products sold by e-commerce on the EU market
Food Research International
2023
Genetic diversity and climatic suitability over time of Baetodes huaico (Ephemeroptera: Baetidae)
Zoologischer Anzeiger
2023
THAPBI PICT—a fast, cautious, and accurate metabarcoding analysis pipeline
PeerJ
2023
Aquatic environmental DNA: A review of the macro-organismal biomonitoring revolution
Science of The Total Environment
2023
Metabarcoding and applied ecology with hyperdiverse organisms: Recommendations for biological control research
Molecular Ecology
2023
Assessing arthropod diversity metrics derived from stream environmental DNA: spatiotemporal variation and paired comparisons with manual sampling
PeerJ
2023
Trophic ecology of a migratory shorebird community at a globally important non-breeding site: combining DNA metabarcoding and conventional techniques
Marine Ecology Progress Series
2023
BeeDNA: Microfluidic environmental DNA metabarcoding as a tool for connecting plant and pollinator communities
Environmental DNA
2023
Can the Eurasian otter (Lutra lutra) be used as an effective sampler of fish diversity? Using molecular assessment of otter diet to survey fish communities
Metabarcoding and Metagenomics
2023
Female pond bats hunt in other areas than males and consume lighter prey when pregnant
Journal of Mammalogy
2023
A novel biological sources consistency evaluation method reveals high level of biodiversity within wild natural medicine: A case study of Amynthas earthworms as “Guang Dilong”
Acta Pharmaceutica Sinica B
2023
A red listing gap analysis of molluscs and crustaceans in Northern Europe: What has happened in the last 10 years?
Biological Conservation
2023
Optimal sequence similarity thresholds for clustering of molecular operational taxonomic units inDNAmetabarcoding studies
Molecular Ecology Resources
2023
Does phylogeny explain bias in quantitative DNA metabarcoding?
Metabarcoding and Metagenomics
2023
Assessing flower‐visiting arthropod diversity in apple orchards through metabarcoding of environmental DNA from flowers and visual census
Environmental DNA
2023
Development of novel PCR primer sets for DNA barcoding of aquatic insects, and the discovery of some cryptic species
Limnology
2022
Metabarcoding versus mapping unassembled shotgun reads for identification of prey consumed by arthropod epigeal predators
GigaScience
2022
DNA High-Throughput Sequencing for Arthropod Gut Content Analysis to Evaluate Effectiveness and Safety of Biological Control Agents
Neotropical Entomology
2022
Variation in diet composition and its relation to gut microbiota in a passerine bird
Scientific Reports
2022
Comparative environmental RNA and DNA metabarcoding analysis of river algae and arthropods for ecological surveys and water quality assessment
Scientific Reports
2021
Assessment of stream macroinvertebrate communities with eDNA is not congruent with tissue‐based metabarcoding
Molecular Ecology
2021
TaxonTableTools: A comprehensive, platform‐independent graphical user interface software to explore and visualise DNA metabarcoding data
Molecular Ecology Resources
2021
Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools
Molecular Ecology
2021
A novel trap design for non-lethal monitoring of dung beetles using eDNA metabarcoding
Journal of Insect Conservation
2021
Seasonal turnover in community composition of stream‐associated macroinvertebrates inferred from freshwater environmental DNA metabarcoding
Environmental DNA
2021
High‐throughput identification of non‐marine Ostracoda from the Tibetan Plateau: Evaluating the success of various primers on sedimentary DNA samples
Environmental DNA
2021
Morphological vs. DNA metabarcoding approaches for the evaluation of stream ecological status with benthic invertebrates: Testing different combinations of markers and strategies of data filtering
Molecular Ecology
2021
Macroinvertebrate community assessment and biomonitoring of European water bodies. Is a multimarker approach necessary?
ARPHA Conference Abstracts
2021
Environmental DNA metabarcoding of cow dung reveals taxonomic and functional diversity of invertebrate assemblages
Molecular Ecology
2021
Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding
Molecular Ecology
2021
Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers
Molecular Ecology
2021
Food for everyone: Differential feeding habits of cryptic bat species inferred from DNA metabarcoding
Molecular Ecology
2021
Improved freshwater macroinvertebrate detection from environmental DNA through minimized nontarget amplification
Environmental DNA
2021
Exploring the Use of Environmental DNA (eDNA) to Detect Animal Taxa in the Mesopelagic Zone
Frontiers in Ecology and Evolution
2021
Molecular assessment of dietary niche partitioning in an endemic island radiation of tropical mammals
Molecular Ecology
2021
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates
Water
2020
Metabarcoding demonstrates dietary niche partitioning in two coexisting blackfish species
Marine and Freshwater Research
2020
Time-series transition of the community structure of aquatic insects at middle domain of Natori river basin in Miyagi Prefecture as revealed by eDNA metabarcoding analysis.
Ecology and Civil Engineering
2020
Insights into aphid prey consumption by ladybirds: Optimising field sampling methods and primer design for high throughput sequencing
PLOS ONE
2020
Enhancing DNA metabarcoding performance and applicability with bait capture enrichment and DNA from conservative ethanol
Molecular Ecology Resources
2020
A practical guide to DNA metabarcoding for entomological ecologists
Ecological Entomology
2020
In silico and empirical evaluation of twelve metabarcoding primer sets for insectivorous diet analyses
Ecology and Evolution
2020
Uncovering the complete biodiversity structure in spatial networks: the example of riverine systems
Oikos
2020
Tagsteady: A metabarcoding library preparation protocol to avoid false assignment of sequences to samples
Molecular Ecology Resources
2020
Evaluation and utility of mitochondrial ribosomal genes for molecular systematics of parasitic nematodes
Parasites & Vectors
2019
Non‐specific amplification compromises environmental DNA metabarcoding with COI
Methods in Ecology and Evolution
2019
Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia)
Parasites & Vectors
2019
How quantitative is metabarcoding: A meta‐analytical approach
Molecular Ecology
2019
Quantitative multi‐locus metabarcoding and waggle dance interpretation reveal honey bee spring foraging patterns in Midwest agroecosystems
Molecular Ecology
2019
High-throughput terrestrial biodiversity assessments: mitochondrial metabarcoding, metagenomics or metatranscriptomics?
Mitochondrial DNA Part A
2019
Validation of COI metabarcoding primers for terrestrial arthropods
PeerJ
2019
DNA metabarcoding to assess diet partitioning and feeding strategies in generalist vertebrate predators: a case study on three syntopic lacertid lizards from Morocco
Biological Journal of the Linnean Society
2019
Establishing arthropod community composition using metabarcoding: Surprising inconsistencies between soil samples and preservative ethanol and homogenate from Malaise trap catches
Molecular Ecology Resources
2019
Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropods
Ecology and Evolution
2019
RELATIONSHIP BETWEEN STREAM INSECTS’ BIOMASS AND ENVIRONMENTAL DNA DERIVED BY METABARCODING AND QUANTITATIVE PCR
Journal of Japan Society of Civil Engineers, Ser. G (Environmental Research)
2019
Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists
Molecular Ecology Resources
2019
The choice of universal primers and the characteristics of the species mixture determine when DNA metabarcoding can be quantitative
Molecular Ecology
2019
Scaling up DNA metabarcoding for freshwater macrozoobenthos monitoring
Freshwater Biology
2019
Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds
Hydrobiologia
2019
Evaluating next‐generation sequencing (NGS) methods for routine monitoring of wild bees: Metabarcoding, mitogenomics or NGS barcoding
Molecular Ecology Resources
2019
Metabarcoding a diverse arthropod mock community
Molecular Ecology Resources
2019
New mitochondrial primers for metabarcoding of insects, designed and evaluated using in silico methods
Molecular Ecology Resources
2018
Comparison of environmental DNA and bulk‐sample metabarcoding using highly degenerate cytochrome c oxidase I primers
Molecular Ecology Resources
2018
The influence of macroinvertebrate abundance on the assessment of freshwater quality in The Netherlands
Metabarcoding and Metagenomics
2018
Why the COI barcode should be the community DNA metabarcode for the metazoa
Molecular Ecology
2018
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
Metabarcoding and Metagenomics
2018
Scrutinizing key steps for reliable metabarcoding of environmental samples
Methods in Ecology and Evolution
2018
The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems
Science of The Total Environment
2018
Slippage of degenerate primers can cause variation in amplicon length
Scientific Reports
2018
The effect of DNA degradation bias in passive sampling devices on metabarcoding studies of arthropod communities and their associated microbiota
PLOS ONE
2018
Environmental microbiology: Perspectives for legal and occupational medicine
Legal Medicine
2018
A broadly applicable COI primer pair and an efficient single‐tube amplicon library preparation protocol for metabarcoding
Ecology and Evolution
2018
Metabarcoding by capture using a single COI probe (MCSP) to identify and quantify fish species in ichthyoplankton swarms
PLOS ONE
2018
Metabarcoding using multiplexed markers increases species detection in complex zooplankton communities
Evolutionary Applications
2018
Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis
Molecular Ecology Resources
2017
Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities
Scientific Reports
2017
Short COI markers for freshwater macroinvertebrate metabarcoding
Metabarcoding and Metagenomics
2017
Estimating and mitigating amplification bias in qualitative and quantitative arthropod metabarcoding
Scientific Reports
2017
Zeylanicobdella arugamensis , the marine leech from cultured crimson snapper ( Lutjanus erythropterus ), Jerejak Island, Penang, Malaysia
Asian Pacific Journal of Tropical Biomedicine
2017
The marker choice: Unexpected resolving power of an unexplored CO1 region for layered DNA barcoding approaches
PLOS ONE
2017
A from‐benchtop‐to‐desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies
Molecular Ecology Resources
2017
Corrigendum: Validation and Development of COI Metabarcoding Primers for Freshwater Macroinvertebrate Bioassessment
Frontiers in Environmental Science
2017
Validation and Development of COI Metabarcoding Primers for Freshwater Macroinvertebrate Bioassessment
Frontiers in Environmental Science
2016
Insect phylogenetics in the digital age
Current Opinion in Insect Science
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