Citation sources

Updated weekly. Details via Crossref
Crossref Scopus Google Scholar
91 66 Search
2025
Advantages of Next‐Generation Technologies in Comparison to Standard and Commonly Used Methods in the Identification of Colonized Bacteria in the Herniated Lumbar Disc
Cellular Microbiology
2025
Establishing genome sequencing and assembly for non-model and emerging model organisms: a brief guide
Frontiers in Zoology
2024
Pinpointing the microbiota of tardigrades: What is really there?
Environmental Microbiology
2024
Genomic characterisation and ecological distribution of Mantoniella tinhauana: a novel Mamiellophycean green alga from the Western Pacific
Frontiers in Microbiology
2024
Methods in Enzymology
2024
MuDoGeR: Multi‐Domain Genome recovery from metagenomes made easy
Molecular Ecology Resources
2023
Increasing temperature-driven changes in life history traits and gene expression of an Antarctic tardigrade species
Frontiers in Physiology
2023
Shaping eukaryotic epigenetic systems by horizontal gene transfer
BioEssays
2023
Mirusviruses link herpesviruses to giant viruses
Nature
2023
Recovery of 197 eukaryotic bins reveals major challenges for eukaryote genome reconstruction from terrestrial metagenomes
Molecular Ecology Resources
2023
Metabolic independence drives gut microbial colonization and resilience in health and disease
Genome Biology
2022
Contamination detection in genomic data: more is not enough
Genome Biology
2022
A High-Quality Fungal Genome Assembly Resolved from a Sample Accidentally Contaminated by Multiple Taxa
BioTechniques
2022
Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean
The ISME Journal
2022
Examples of Extreme Survival: Tardigrade Genomics and Molecular Anhydrobiology
Annual Review of Animal Biosciences
2022
Intragenomic variation in nuclear ribosomal markers and its implication in species delimitation, identification and barcoding in fungi
Fungal Biology Reviews
2022
Tiara: deep learning-based classification system for eukaryotic sequences
Bioinformatics
2022
Current Topics in Developmental Biology
2022
Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA
Nature Communications
2022
Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
Cell Genomics
2022
Deciphering the Biological Enigma—Genomic Evolution Underlying Anhydrobiosis in the Phylum Tardigrada and the Chironomid Polypedilum vanderplanki
Insects
2021
Discovery of Viral Myosin Genes With Complex Evolutionary History Within Plankton
Frontiers in Microbiology
2021
Accurate annotation of protein coding sequences with IDTAXA
NAR Genomics and Bioinformatics
2021
Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Advanced Genetics
2021
Microbial Ecology of Oxygen Minimum Zones Amidst Ocean Deoxygenation
Frontiers in Microbiology
2020
Genome Survey Sequencing of In Vivo Mother Plant and In Vitro Plantlets of Mikania cordata
Plants
2020
Genome Sequences and Metagenome-Assembled Genome Sequences of Microbial Communities Enriched on Phytoplankton Exometabolites
Microbiology Resource Announcements
2020
The Genome of the Blind Soil-Dwelling and Ancestrally Wingless Dipluran Campodea augens: A Key Reference Hexapod for Studying the Emergence of Insect Innovations
Genome Biology and Evolution
2020
Bacterial colonization reprograms the neonatal gut metabolome
Nature Microbiology
2020
The reuse of public datasets in the life sciences: potential risks and rewards
PeerJ
2020
Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters
Water Research
2020
Two hundred and fifty-four metagenome-assembled bacterial genomes from the bank vole gut microbiota
Scientific Data
2020
Prevalence and Implications of Contamination in Public Genomic Resources: A Case Study of 43 Reference Arthropod Assemblies
G3 Genes|Genomes|Genetics
2020
BlobToolKit – Interactive Quality Assessment of Genome Assemblies
G3 Genes|Genomes|Genetics
2020
Accurate and complete genomes from metagenomes
Genome Research
2019
Host‐derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin
Molecular Ecology
2019
The Wolbachia mobilome in Culex pipiens includes a putative plasmid
Nature Communications
2019
Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments
Microbiome
2019
A Bioinformatics Guide to Plant Microbiome Analysis
Frontiers in Plant Science
2019
Human contamination in bacterial genomes has created thousands of spurious proteins
Genome Research
2019
Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing
BMC Genomics
2019
Coastal Ocean Metagenomes and Curated Metagenome-Assembled Genomes from Marsh Landing, Sapelo Island (Georgia, USA)
Microbiology Resource Announcements
2019
Composite Metagenome-Assembled Genomes Reduce the Quality of Public Genome Repositories
mBio
2019
Staying young and fit? Ontogenetic and phylogenetic consequences of animal anhydrobiosis
Journal of Zoology
2019
Horizontal Gene Transfer
2018
Comparative genomics of bdelloid rotifers: Insights from desiccating and nondesiccating species
PLOS Biology
2018
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Microbiome
2018
Analyses of nervous system patterning genes in the tardigrade Hypsibius exemplaris illuminate the evolution of panarthropod brains
EvoDevo
2018
The Emergence of the TardigradeHypsibius exemplarisas a Model System
Cold Spring Harbor Protocols
2018
Application of next‐generation sequencing to the study of non‐model insects
Entomological Science
2018
The Microbial Community of Tardigrades: Environmental Influence and Species Specificity of Microbiome Structure and Composition
Microbial Ecology
2018
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
Nature Microbiology
2018
Horizontally transferred genes in the ctenophoreMnemiopsis leidyi
PeerJ
2017
Preprinting Microbiology
mBio
2017
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
Nature Biotechnology
2017
PhylOligo: a package to identify contaminant or untargeted organism sequences in genome assemblies
Bioinformatics
2017
Challenging a bioinformatic tool’s ability to detect microbial contaminants usingin silicowhole genome sequencing data
PeerJ
2017
Comparative Metagenomics of the Polymicrobial Black Band Disease of Corals
Frontiers in Microbiology
2017
Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus
PLOS Biology
2017
Decontaminating eukaryotic genome assemblies with machine learning
BMC Bioinformatics
2016
Reply to Bemm et al. and Arakawa: Identifying foreign genes in independent Hypsibius dujardini genome assemblies
Proceedings of the National Academy of Sciences
2016
Genome sequencing of a single tardigrade Hypsibius dujardini individual
Scientific Data
2016
No evidence for extensive horizontal gene transfer from the draft genome of a tardigrade
Proceedings of the National Academy of Sciences
2016
A tale of two tardigrades
Proceedings of the National Academy of Sciences
2016
Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis
Proceedings of the National Academy of Sciences
2016
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini
Proceedings of the National Academy of Sciences
Additional cited-by details will be shown when available from Crossref