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2025	iAMP-EmGCN: A new design for identifying antimicrobial peptides based on BERT and Graph Convolutional Network Expert Systems with Applications Wenxuan Xing, Jie Zhang, Chen Li, Gaifang Dong
2025	Antimicrobial peptides: from discovery to developmental applications Applied and Environmental Microbiology Qi Zhang
2025	In Silico Identification and Molecular Characterization of Lentilactobacillus hilgardii Antimicrobial Peptides with Activity Against Carbapenem-Resistant Acinetobacter baumannii Antibiotics Amanda Appel, Lily Velazco, Adit B. Alreja, Kara LeClair, Aryaan P. Duggal, Isha Vashee, Aji Mary Taal, Norberto Gonzalez-Juarbe, Derrick E. Fouts
2025	Microbial production systems and optimization strategies of antimicrobial peptides: a review World Journal of Microbiology and Biotechnology Mengxue Lou, Shuaiqi Ji, Rina Wu, Yi Zhu, Junrui Wu, Jiachao Zhang
2025	Predicting Antimicrobial Class Specificity of Small Molecules Using Machine Learning Journal of Chemical Information and Modeling Yojana Gadiya, Olga Genilloud, Ursula Bilitewski, Mark Brönstrup, Leonie von Berlin, Marie Attwood, Philip Gribbon, Andrea Zaliani
2025	Research Advance in the Development of Antimicrobial Peptides Using Deep Learning Journal of Computational Chemistry Yuchen Hu, Junchao Zhou, Yuhang Gao, Ban Chen, Jiangtao Su, Hong Li, Wen Wu
2025	PAPreC: A Pipeline for Antigenicity Prediction Comparison Methods across Bacteria ACS Omega Yasmmin C. Martins, Maiana O. Cerqueira e Costa, Miranda C. Palumbo, Dario F. Do Porto, Fábio L. Custódio, Raphael Trevizani, Marisa Fabiana Nicolás
2025	AmpHGT: expanding prediction of antimicrobial activity in peptides containing non-canonical amino acids using multi-view constrained heterogeneous graph transformer BMC Biology Yongcheng He, Xu Song, Hongping Wan, Xinghong Zhao
2025	In Silico Peptide Design: Methods, Resources, and Role of AI Journal of Peptide Science Priyanka Ray Choudhury, Sai Kumar Mishra, Siddharth Yadav, Shubhi Singh, Puniti Mathur
2025	Machine Learning‐Assisted Prediction and Generation of Antimicrobial Peptides Small Science Sukhvir Kaur Bhangu, Nicholas Welch, Morgan Lewis, Fanyi Li, Brint Gardner, Helmut Thissen, Wioleta Kowalczyk
2025	Unveiling the evolution of antimicrobial peptides in gut microbes via foundation-model-powered framework Cell Reports Wenhui Li, Baicheng Huang, Menghao Guo, Zihan Zeng, Tao Cai, Linqing Feng, Xinpeng Zhang, Ling Guo, Xianyue Jiang, Yanbin Yin, Ercheng Wang, Xingxu Huang, Jinfang Zheng
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