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2025	Optimization of genomic DNA and total RNA extraction protocols from microlepidopterans for high-fidelity long-read sequencing BMC Methods Eliza F. M. B. Nascimento, Erick L. S. Queiroz, Leonardo A. Vidal, Camila I. C. V. F. Junqueira, Bruno H. S. Souza, Donald Manigat, Andrea Q. Maranhão, Érika V. S. Albuquerque
2025	Transcriptional response in larvae of the generalist fruit fly Anastrepha obliqua feeding on three different tropical host plants Entomologia Experimentalis et Applicata Sandra M. Velasco‐Cuervo, César A. Lemos‐Lucumi, Maria R. Manzano, Stephen E. Strelkov, Nelson Toro‐Perea, Leonardo Galindo‐González
2025	Evidence for the replication of a plant rhabdovirus in its arthropod mite vector Virus Research Hideki Kondo, Miki Fujita, Paul Telengech, Kazuyuki Maruyam, Kiwamu Hyodo, Aline Daniele Tassi, Ronald Ochoa, Ida Bagus Andika, Nobuhiro Suzuki
2024	Simple protocol for combined extraction of exocrine secretions and RNA in small arthropods Biology Methods and Protocols David Fröhlich, Michaela Bodner, Günther Raspotnig, Christoph Hahn
2024	Trophic Position of the White Worm (Enchytraeus albidus) in the Context of Digestive Enzyme Genes Revealed by Transcriptomics Analysis International Journal of Molecular Sciences Łukasz Gajda, Agata Daszkowska-Golec, Piotr Świątek
2023	Comparison of five commercial kits for isolation of total RNA in samples of WSSV-infected shrimp Diseases of Aquatic Organisms T Encinas-García, F Mendoza-Cano, A Muhlia-Almazán, J Vega-Peralta, A Sánchez-Paz
2023	Transcriptional and metabolomic investigation of the stress response in snow crab during simulated transport condition (Chionoecetes opilio) Comparative Biochemistry and Physiology Part D: Genomics and Proteomics Claude Power, Simon G. Lamarre, Anne-Marie Dion-Côté
2023	The transcriptome profile of the marine Calanoid copepod Parvocalanus crassirostris isolated from Kuwait territorial waters and generations cultured under different ocean acidification scenarios Regional Studies in Marine Science Nazima Habibi, Saif Uddin, Montaha Behbehani, Mohd. Wasif Khan, Nasreem Abdul Razzack, Faiz Shirshikhar
2023	Data on SSR markers and SNPs filtered from transcriptome of Parvocalanus crassirostris Data in Brief Nazima Habibi, Saif Uddin, Montaha Behebehani, Mohd Wasif Khan, Nasreem Abdul Razzack, Faiz Shirshikhar
2022	De novo transcriptome assemblies of red king crab (Paralithodes camtschaticus) and snow crab (Chionoecetes opilio) molting gland and eyestalk ganglia - Temperature effects on expression of molting and growth regulatory genes in adult red king crab Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology Øivind Andersen, Hanne Johnsen, Astrid C. Wittmann, Lars Harms, Tina Thesslund, Ragnhild Stenberg Berg, Sten Siikavuopio, Donald L. Mykles
2022	Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene Marine Genomics Fekadu Yadetie, Nadja R. Brun, Julia Giebichenstein, Katarzyna Dmoch, Ketil Hylland, Katrine Borgå, Odd André Karlsen, Anders Goksøyr
2021	De novo transcriptome assembly of the Southern Ocean copepod Rhincalanus gigas sheds light on developmental changes in gene expression Marine Genomics Cory A. Berger, Deborah K. Steinberg, Nancy J. Copley, Ann M. Tarrant
2021	Characterization of the hidden break in giant clam 28S ribosomal RNA Journal of Molluscan Studies Keana Tan, Cecilia Conaco
2020	Initial Virome Characterization of the Common Cnidarian Lab Model Nematostella vectensis Viruses Magda Lewandowska, Yael Hazan, Yehu Moran
2020	Shedding light: a phylotranscriptomic perspective illuminates the origin of photosymbiosis in marine bivalves BMC Evolutionary Biology Jingchun Li, Sarah Lemer, Lisa Kirkendale, Rüdiger Bieler, Colleen Cavanaugh, Gonzalo Giribet
2019	Whole transcriptome analysis of an estuarine amphipod exposed to highway road dust Science of The Total Environment Kyoshiro Hiki, Fumiyuki Nakajima, Tomohiro Tobino, Haruna Watanabe, Hiroshi Yamamoto
2019	Molecular physiology of copepods - from biomarkers to transcriptomes and back again Comparative Biochemistry and Physiology Part D: Genomics and Proteomics Ann M. Tarrant, Birgitte Nilsson, Benni Winding Hansen
2019	The β-oxidation pathway is downregulated during diapause termination in Calanus copepods Scientific Reports Elise Skottene, Ann M. Tarrant, Anders J. Olsen, Dag Altin, Mari-Ann Østensen, Bjørn Henrik Hansen, Marvin Choquet, Bjørn M. Jenssen, Rolf Erik Olsen
2019	Computational discovery of hidden breaks in 28S ribosomal RNAs across eukaryotes and consequences for RNA Integrity Numbers Scientific Reports Paschalis Natsidis, Philipp H. Schiffer, Irepan Salvador-Martínez, Maximilian J. Telford
2019	IDENTIFICATION OF ANTIOXIDANT GENES IN THE OSTRACOD <i>Heterocypris incongruens</i> THROUGH DE NOVO TRANSCRIPTOME SEQUENCING Journal of JSCE Kyoshiro HIKI, Masanori TSUCHIKAWA, Fumiyuki NAKAJIMA, Tomohiro TOBINO
2019	A Crude Awakening: Effects of Crude Oil on Lipid Metabolism in Calanoid Copepods Terminating Diapause The Biological Bulletin Elise Skottene, Ann M. Tarrant, Anders J. Olsen, Dag Altin, Bjørn Henrik Hansen, Marvin Choquet, Rolf Erik Olsen, Bjørn M. Jenssen
2018	Environmental Stress Responses and Experimental Handling Artifacts of a Model Organism, the Copepod Acartia tonsa (Dana) Frontiers in Marine Science Birgitte Nilsson, Per M. Jepsen, Ann Bucklin, Benni W. Hansen
2018	Guidelines for RNA-seq projects: applications and opportunities in non-model decapod crustacean species Hydrobiologia Tuan Viet Nguyen, Hyungtaek Jung, Guiomar Rotllant, David Hurwood, Peter Mather, Tomer Ventura
2018	RNA profile diversity across arthropoda: guidelines, methodological artifacts, and expected outcomes Biology Methods and Protocols Danielle M DeLeo, Jorge L Pérez-Moreno, Hernán Vázquez-Miranda, Heather D Bracken-Grissom
2017	Impact of teflubenzuron on the rockpool shrimp (Palaemon elegans) Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology Pål A. Olsvik, Bjørn T. Lunestad, Ann-Lisbeth Agnalt, Ole B. Samuelsen
2016	Transcriptome sequences spanning key developmental states as a resource for the study of the cestode Schistocephalus solidus, a threespine stickleback parasite Gigascience François Olivier Hébert, Stephan Grambauer, Iain Barber, Christian R Landry, Nadia Aubin-Horth
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