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Sayed Golam Mohiuddin, Pouria Kavousi, Diego Figueroa, Sreyashi Ghosh, Mehmet A. Orman

Matthew J. Jago, Jake K. Soley, Stepan Denisov, Calum J. Walsh, Danna R. Gifford, Benjamin P. Howden, Mato Lagator

Heladia Salgado, Socorro Gama-Castro, Paloma Lara, Citlalli Mejia-Almonte, Gabriel Alarcón-Carranza, Andrés G López-Almazo, Felipe Betancourt-Figueroa, Pablo Peña-Loredo, Shirley Alquicira-Hernández, Daniela Ledezma-Tejeida, Lizeth Arizmendi-Zagal, Francisco Mendez-Hernandez, Ana K Diaz-Gomez, Elizabeth Ochoa-Praxedis, Luis J Muñiz-Rascado, Jair S García-Sotelo, Fanny A Flores-Gallegos, Laura Gómez, César Bonavides-Martínez, Víctor M del Moral-Chávez, Alfredo J Hernández-Alvarez, Alberto Santos-Zavaleta, Salvador Capella-Gutierrez, Josep Lluis Gelpi, Julio Collado-Vides

Hui Yang, Bo Zhang, Zidan Wu, Jiayuan Pan, Lifeng Chen, Xiaoling Xiu, Xue Cai, Zhiqiang Liu, Yuguo Zheng

Anna A. Rybina, Roman A. Glushak, Tatiana A. Bessonova, Artemiy I. Dakhnovets, Alexander Yu. Rudenko, Ratislav M. Ozhiganov, Anna D. Kaznadzey, Maria N. Tutukina, Mikhail S. Gelfand

Girish H. Rajacharya, Ashima Sharma, Syed Shams Yazdani

Adriana Bentancor, Ximena Blanco Crivelli, Claudia Piccini, Gabriel Trueba

2025	pheST operon dynamics and pheS gene duplication mediated genome stability and evolution in E. coli: evidence that fitC4 is an allele of pheS Molecular Biology Reports Praveen Belagal
2025	Mono- and multidomain defense toxins of the RelE/ParE superfamily mBio Kenn Gerdes
2025	The diverse phenotypic and mutational landscape induced by fluoroquinolone treatment mSystems Sayed Golam Mohiuddin, Pouria Kavousi, Diego Figueroa, Sreyashi Ghosh, Mehmet A. Orman
2025	High-throughput method characterizes hundreds of previously unknown antibiotic resistance mutations Nature Communications Matthew J. Jago, Jake K. Soley, Stepan Denisov, Calum J. Walsh, Danna R. Gifford, Benjamin P. Howden, Mato Lagator
2025	Applied DNA visibility graphs: Understanding DNA structure-function relationship in genomics Physica A: Statistical Mechanics and its Applications Kosmas Kosmidis
2024	RegulonDB v12.0: a comprehensive resource of transcriptional regulation inE. coliK-12 Nucleic Acids Research Heladia Salgado, Socorro Gama-Castro, Paloma Lara, Citlalli Mejia-Almonte, Gabriel Alarcón-Carranza, Andrés G López-Almazo, Felipe Betancourt-Figueroa, Pablo Peña-Loredo, Shirley Alquicira-Hernández, Daniela Ledezma-Tejeida, Lizeth Arizmendi-Zagal, Francisco Mendez-Hernandez, Ana K Diaz-Gomez, Elizabeth Ochoa-Praxedis, Luis J Muñiz-Rascado, Jair S García-Sotelo, Fanny A Flores-Gallegos, Laura Gómez, César Bonavides-Martínez, Víctor M del Moral-Chávez, Alfredo J Hernández-Alvarez, Alberto Santos-Zavaleta, Salvador Capella-Gutierrez, Josep Lluis Gelpi, Julio Collado-Vides
2024	Synergistic application of atmospheric and room temperature plasma mutagenesis and adaptive laboratory evolution improves the tolerance of Escherichia coli to L‐cysteine Biotechnology Journal Hui Yang, Bo Zhang, Zidan Wu, Jiayuan Pan, Lifeng Chen, Xiaoling Xiu, Xue Cai, Zhiqiang Liu, Yuguo Zheng
2024	Phylogeny and structural modeling of the transcription factor CsqR (YihW) from Escherichia coli Scientific Reports Anna A. Rybina, Roman A. Glushak, Tatiana A. Bessonova, Artemiy I. Dakhnovets, Alexander Yu. Rudenko, Ratislav M. Ozhiganov, Anna D. Kaznadzey, Maria N. Tutukina, Mikhail S. Gelfand
2024	Proteomics and metabolic burden analysis to understand the impact of recombinant protein production in E. coli Scientific Reports Girish H. Rajacharya, Ashima Sharma, Syed Shams Yazdani
2024	Transcriptional Regulation in Bacteria Microorganisms Tomohiro Shimada
2023	Trending Topics in Escherichia coli Research Adriana Bentancor, Ximena Blanco Crivelli, Claudia Piccini, Gabriel Trueba
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