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2026	Ricci-GraphDTA: A graph neural network integrating discrete Ricci curvature for drug–target affinity prediction Journal of Molecular Graphics and Modelling Xiangxiang Zheng, Zhongrong Zhang, Xiaona Zhang, Nengzhi Jin, Yunyun Zhang
2025	Kolmogorov-Arnold networks for predicting drug-gene associations of HDAC1 inhibitors in periodontitis Computational Biology and Chemistry Pradeep Kumar Yadalam, Swarnambiga Ayyachamy, Francisco T. Barbosa, Prabhu Manickam Natarajan
2025	MiRAGE-DTI: A novel approach for drug–target interaction prediction by integrating drug and target similarity metrics Computers in Biology and Medicine Aria Hassanali Aragh, Razieh Moslemi Amirani, Pegah Givehchian, Maryam Eskafi, Yeganeh Abbasian Bajgiran, Changiz Eslahchi
2025	Possible Drug Repurposing and Accelerated Wound Healing Regenerative Engineering and Translational Medicine Aakash Kumar S, Snehal S Patel
2025	Deep learning methods and applications in single-cell multimodal data integration Molecular Omics Franklin Vinny Medina Nunes, Luiza Marques Prates Behrens, Rafael Diogo Weimer, Gabriela Flores Gonçalves, Guilherme da Silva Fernandes, Márcio Dorn
2025	CF-DTI: coarse-to-fine feature extraction for enhanced drug-target interaction prediction Health Information Science and Systems Yining Qian, Qingjie Wang, Libang Yin, An-Yang Lu
2025	A Survey on Recommender Systems Using Graph Neural Network ACM Transactions on Information Systems Vineeta Anand, Ashish Kumar Maurya
2025	Lecture Notes in Computer Science Satansu Mohanty, Chandra Mohan Dasari
2025	Decoding HDACs and its inhibitors-artificial intelligence assisted smart software based super computational modelling technology in targeting cancer and neurological disorders of the brain Network Modeling Analysis in Health Informatics and Bioinformatics Amber Rizwan, Aatiquah Aqeel, Humaira Farooqi
2025	Drug repositioning framework using embedding drug-protein-disease similarities with graph convolution network and ensemble learning Intelligent Systems with Applications Hanaa Torkey, Heba El-Behery, Abdel-Fattah Atti, Nawal El-Fishawy
2025	Advancing ADMET prediction for major CYP450 isoforms: graph-based models, limitations, and future directions BioMedical Engineering OnLine Asmaa A. Abdelwahab, Mustafa A. Elattar, Sahar Ali Fawzi
2025	GramSeq-DTA: A Grammar-Based Drug–Target Affinity Prediction Approach Fusing Gene Expression Information Biomolecules Kusal Debnath, Pratip Rana, Preetam Ghosh
2025	Anais do XXV Simpósio Brasileiro de Computação Aplicada à Saúde (SBCAS 2025) Jaqueline Bitencourt, Anderson Tavares
2025	Communications in Computer and Information Science Chandra Mohan Dasari, Dheeraj Kodati, Nivesh Mittapally, A. Srinivas Reddy, P. Krishna Reddy
2025	Advances in Pharmacology Sushanta Kumar Das, Rahul Mishra, Amit Samanta, Dibyendu Shil, Saumendu Deb Roy
2025	Drug-target interaction/affinity prediction: Deep learning models and advances review Computers in Biology and Medicine Ali Vefghi, Zahed Rahmati, Mohammad Akbari
2024	Neural multi-task learning in drug design Nature Machine Intelligence Stephan Allenspach, Jan A. Hiss, Gisbert Schneider
2024	Eliminating bias: enhancing children’s book recommendation using a hybrid model of graph convolutional networks and neural matrix factorization PeerJ Computer Science Lijuan Shen, Liping Jiang
2024	GDilatedDTA: Graph dilation convolution strategy for drug target binding affinity prediction Biomedical Signal Processing and Control Longxin Zhang, Wenliang Zeng, Jingsheng Chen, Jianguo Chen, Keqin Li
2023	Pharmacophoric-constrained heterogeneous graph transformer model for molecular property prediction Communications Chemistry Yinghui Jiang, Shuting Jin, Xurui Jin, Xianglu Xiao, Wenfan Wu, Xiangrong Liu, Qiang Zhang, Xiangxiang Zeng, Guang Yang, Zhangming Niu
2023	Open-Source Machine Learning in Computational Chemistry Journal of Chemical Information and Modeling Alexander Hagg, Karl N. Kirschner
2023	Lecture Notes in Networks and Systems Lim Khai Sian, J. Joshua Thomas
2023	Network Learning for Biomarker Discovery International Journal of Network Dynamics and Intelligence Yulian Ding, Minghan Fu, Ping Luo, Fang-Xiang Wu
2022	GeneralizedDTA: combining pre-training and multi-task learning to predict drug-target binding affinity for unknown drug discovery BMC Bioinformatics Shaofu Lin, Chengyu Shi, Jianhui Chen
2022	Toward brain organoid-based precision medicine in neurodegenerative diseases Organoid Jong-Chan Park, Inhee Mook-Jung
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