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2025
An updated phylogeny of Boraginales based on the Angiosperms353 probe set: a roadmap for understanding morphological evolution
Annals of Botany
2025
Symbiosis and horizontal gene transfer promote herbivory in the megadiverse leaf beetles
Current Biology
2025
Navigating phylogenetic conflict and evolutionary inference in plants with target-capture data
Australian Systematic Botany
2025
Discovery of novel targets for important human and plant fungal pathogens via an automated computational pipeline HitList
PLOS One
2025
Novel Toxin Biosynthetic Gene Cluster in Harmful Algal Bloom-Causing Heteroscytonema crispum: Insights into the Origins of Paralytic Shellfish Toxins
Genome Biology and Evolution
2025
Exploring Large Protein Sequence Space through Homology- and Representation-based Hierarchical Clustering
Molecular Biology and Evolution
2025
Nuclear phylogenomics reveals strong geographic patterns in the evolutionary history of Aloe and related genera (alooids)
Annals of Botany
2025
The many origins of extremophile fishes
Proceedings of the Royal Society B: Biological Sciences
2025
A densely sampled nuclear phylogenomic analysis of the coryphoid palms (Arecaceae: Coryphoideae)
TAXON
2025
Cenozoic evolutionary history obscures the Mesozoic origins of acanthopterygian fishes
Evolution
2025
Tiny Hunters Along the Alpine Fault: Integrative Phylobiogeography Demonstrates High Geographic Structure in a Forest‐Dwelling Aotearoa Harvester Genus (Arachnida, Triaenonychidae: Algidia)
Journal of Biogeography
2025
VirDetector: a bioinformatic pipeline for virus surveillance using nanopore sequencing
Bioinformatics
2025
Possible Involvement of Ghost Introgressions in the Striking Diversity of Vomeronasal Type 1 Receptor Genes in East African Cichlids
Ecology and Evolution
2025
Metagenomic selections reveal diverse antiphage defenses in human and environmental microbiomes
Cell Host & Microbe
2025
Disconnecting trapdoors: Phylogenomic analyses reveal evolutionary contrasts in trapdoor spiders with intercontinental distribution (Idiopidae, Idiopinae)
Molecular Phylogenetics and Evolution
2025
Untangling New Guinea Cayratia (Vitaceae) using taxonomic and phylogenomic approaches
Kew Bulletin
2024
Comparative Population Genomic Diversity and Differentiation in Trapdoor Spiders and Relatives (Araneae, Mygalomorphae)
Molecular Ecology
2024
Endogenous Bornavirus-like Elements in Bats: Evolutionary Insights from the Conserved Riboviral L-Gene in Microbats and Its Antisense Transcription in Myotis daubentonii
Viruses
2024
Testing ultraconserved elements (UCEs) for phylogenetic inference across bivalves (Mollusca: Bivalvia)
Molecular Phylogenetics and Evolution
2024
Synergistic innovations enabled the radiation of anglerfishes in the deep open ocean
Current Biology
2024
From the shallows to the depths: a new probe set to target ultraconserved elements for Decapoda and other Malacostraca
Frontiers in Marine Science
2024
Broken Ring Speciation in California Mygalomorph Spiders (Nemesiidae,Calisoga)
The American Naturalist
2024
2024 3rd International Conference on Artificial Intelligence For Internet of Things (AIIoT)
2024
Seqrutinator: scrutiny of large protein superfamily sequence datasets for the identification and elimination of non-functional homologues
Genome Biology
2024
Origin of eukaryotic-like Vps23 shapes an ancient functional interplay between ESCRT and ubiquitin system in Asgard archaea
Cell Reports
2024
Selection Across the Three-Dimensional Structure of Venom Proteins from North American Scolopendromorph Centipedes
Journal of Molecular Evolution
2024
Comparing Gold-Standard Sanger Sequencing with Two Next-Generation Sequencing Platforms of HIV-1 gp160 Single Genome Amplicons
AIDS Research and Human Retroviruses
2024
Viroid-like colonists of human microbiomes
Cell
2024
Historical biogeography and the evolution of habitat preference in the North American camel spider family, Eremobatidae (Arachnida:Solifugae)
Molecular Phylogenetics and Evolution
2024
An ultraconserved element probe set for velvet worms (Onychophora)
Molecular Phylogenetics and Evolution
2024
MCHelper automatically curates transposable element libraries across eukaryotic species
Genome Research
2024
2024 IEEE International Conference on Computing (ICOCO)
2024
Evaluating possible anthropogenic impacts on gene flow and loss of genetic diversity in endangered Madla Cave Meshweaver spiders (Hahniidae, Cicurina madla)
Conservation Genetics
2024
Phylogeny and biogeography of harmochirine jumping spiders (Araneae: Salticidae)
Molecular Phylogenetics and Evolution
2024
Reassessing the phylogeny of Cyphophthalmi with phylogenomics: A UCE-based phylogeny of mite harvesters (Opiliones)
Molecular Phylogenetics and Evolution
2024
Under the hood: Phylogenomics of hooded tick spiders (Arachnida, Ricinulei) uncovers discordance between morphology and molecules
Molecular Phylogenetics and Evolution
2023
Species delimitation, biogeography, and natural history of dwarf funnel web spiders (Mygalomorphae, Hexurellidae, Hexurella) from the United States / Mexico borderlands
ZooKeys
2023
Navigating the Landscape: A Comprehensive Review of Current Virus Databases
Viruses
2023
Independent Recruitment of Different Types of Phospholipases A2 to the Venoms of Caenophidian Snakes: The Rise of PLA2-IIE within Pseudoboini (Dipsadidae)
Molecular Biology and Evolution
2023
Long noncoding RNAs emerge from transposon-derived antisense sequences and may contribute to infection stage-specific transposon regulation in a fungal phytopathogen
Mobile DNA
2023
A genome‐wide phylogeny and the diversification of genus Liriomyza (Diptera: Agromyzidae) inferred from anchored phylogenomics
Systematic Entomology
2023
Identification of RNA Virus–Derived RdRp Sequences in Publicly Available Transcriptomic Data Sets
Molecular Biology and Evolution
2023
Sequencing and Characterization of M. morganii Strain UM869: A Comprehensive Comparative Genomic Analysis of Virulence, Antibiotic Resistance, and Functional Pathways
Genes
2023
Multiple and diversified transposon lineages contribute to early and recent bivalve genome evolution
BMC Biology
2023
Topiary: Pruning the manual labor from ancestral sequence reconstruction
Protein Science
2023
Ancient origin of Jingchuvirales derived glycoproteins integrated in arthropod genomes
Genetics and Molecular Biology
2023
Sizing Up the Onychophoran Genome: Repeats, Introns, and Gene Family Expansion Contribute to Genome Gigantism inEpiperipatus broadwayi
Genome Biology and Evolution
2022
Women in the European Virus Bioinformatics Center
Viruses
2022
Closing a biogeographic gap: a new pettalid genus from South Australia (Arachnida : Opiliones : Cyphophthalmi : Pettalidae) with a UCE-based phylogeny of Cyphophthalmi
Invertebrate Systematics
2022
Ribosome profiling of porcine reproductive and respiratory syndrome virus reveals novel features of viral gene expression
eLife
2022
Multiple long-range host shifts of major Wolbachia supergroups infecting arthropods
Scientific Reports
2022
Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine
Nature Communications
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