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Tainara C. Michelotti, Bruno C. Menarim, Alexandra P. Tegeler, Jean F. Fiallo Diez, Vinicius S. Machado, Yava Jones-Hall, Oscar J. Benitez, Shavahn C. Loux, Clarissa Strieder-Barboza

A. I. Gabasawa, G. A. Abubakar, D. N. Obemah

Bolin Chen, Jinlei Zhang, Ci Shao, Jun Bian, Ruiming Kang, Xuequn Shang

Rezvan Adibi, Shiva Moein, Yousof Gheisari

Hossam El-Sheikh Ali, Kirsten Scoggin, Harutaka Murase, Jamie Norris, Bruno Menarim, Pouya Dini, Barry Ball

Anastassiya Perfilyeva, Kira Bespalova, Yuliya Perfilyeva, Liliya Skvortsova, Lyazzat Musralina, Gulnur Zhunussova, Elmira Khussainova, Ulzhan Iskakova, Bakhytzhan Bekmanov, Leyla Djansugurova

Haiting Chai, Quan Gu, David L Robertson, Joseph Hughes

Sandhya Hora, Mohammad Asad, Swatantra Kumar Jain, Deepshikha Pande Katare

Hossam El-Sheikh Ali, Shavahn C. Loux, Laura Kennedy, Kirsten E. Scoggin, Pouya Dini, Carleigh E. Fedorka, Theodore S. Kalbfleisch, Alejandro Esteller-Vico, David W. Horohov, Erdal Erol, Craig N. Carter, Jackie L. Smith, Barry A. Ball

Bruno C. Menarim, Hossam El-Sheikh Ali, Shavahn C. Loux, Kirsten E. Scoggin, Theodore S. Kalbfleisch, James N. MacLeod, Linda A. Dahlgren

Sung Kyoung Kim, Seung Min Jung, Kyung-Su Park, Ki-Jo Kim

Maryam Abedi, Hamid Reza Marateb, Mohammad Reza Mohebian, Seyed Hamid Aghaee-Bakhtiari, Seyed Mahdi Nassiri, Yousof Gheisari

Hossam El-Sheikh Ali, Pouya Dini, Kirsten Scoggin, Shavahn Loux, Carleigh Fedorka, Yatta Boakari, Jamie Norris, Alejandro Esteller-Vico, Theodore Kalbfleisch, Barry Ball

Jae-Wook Oh, Manikandan Muthu, Steve W. Haga, Vimala Anthonydhason, Piby Paul, Sechul Chun

Farnoush Kiyanpour, Maryam Abedi, Yousof Gheisari

Nicole Prince, Julia A. Penatzer, Matthew J. Dietz, Jonathan W. Boyd

H El-Sheikh Ali, Y L Boakari, S C Loux, P Dini, K E Scoggin, A Esteller-Vico, T Kalbfleisch, B A Ball

Xinyu Chong, Rui Peng, Yan Sun, Luyu Zhang, Zheng Zhang

D. Narmadha, A. Pravin, G. Naveen Sundar, Premnath Dhanaraj

Wenhao Jiang, Zheng Zhang, Yan Sun, Yajuan Zhang, Luyu Zhang, Handeng Liu, Rui Peng

Mariano Carossino, Pouya Dini, Theodore S. Kalbfleisch, Alan T. Loynachan, Igor F. Canisso, R. Frank Cook, Peter J. Timoney, Udeni B. R. Balasuriya

Kobra Moradzadeh, Yousof Gheisari

Yesid Cuesta-Astroz, Alberto Santos, Guilherme Oliveira, Lars J. Jensen

Alice A. Han, Holly N. Currie, Matthew S. Loos, Giovanni Scardoni, Julie V. Miller, Nicole Prince, Julia A. Mouch, Jonathan W. Boyd

Amir Taherkhani, Shiva Kalantari, Afsaneh Arefi Oskouie, Mohsen Nafar, Mohammad Taghizadeh, Koorosh Tabar

Rui Fan, Ke Xu, Jichang Zhao

2025	Subclinical ketosis in postpartum dairy cows alters the adipose tissue immunological profile in a depot-specific manner Frontiers in Immunology Tainara C. Michelotti, Bruno C. Menarim, Alexandra P. Tegeler, Jean F. Fiallo Diez, Vinicius S. Machado, Yava Jones-Hall, Oscar J. Benitez, Shavahn C. Loux, Clarissa Strieder-Barboza
2024	Earth and Environmental Sciences Library A. I. Gabasawa, G. A. Abubakar, D. N. Obemah
2024	QIGTD: identifying critical genes in the evolution of lung adenocarcinoma with tensor decomposition BioData Mining Bolin Chen, Jinlei Zhang, Ci Shao, Jun Bian, Ruiming Kang, Xuequn Shang
2023	Cisplatin-Resistant Ovarian Cancer Cells Reveal a Polyploid Phenotype with Remarkable Activation of Nuclear Processes Advanced Biomedical Research Rezvan Adibi, Shiva Moein, Yousof Gheisari
2022	Transcriptomic and histochemical analysis reveal the complex regulatory networks in equine chorioallantois during spontaneous term labor Biology of Reproduction Hossam El-Sheikh Ali, Kirsten Scoggin, Harutaka Murase, Jamie Norris, Bruno Menarim, Pouya Dini, Barry Ball
2022	Integrative Functional Genomic Analysis in Multiplex Autism Families from Kazakhstan Disease Markers Anastassiya Perfilyeva, Kira Bespalova, Yuliya Perfilyeva, Liliya Skvortsova, Lyazzat Musralina, Gulnur Zhunussova, Elmira Khussainova, Ulzhan Iskakova, Bakhytzhan Bekmanov, Leyla Djansugurova
2022	Defining the characteristics of interferon-alpha–stimulated human genes: insight from expression data and machine learning GigaScience Haiting Chai, Quan Gu, David L Robertson, Joseph Hughes
2021	Identification of potential targets with high centrality indicated by diethylnitrosamine + thioacetamide-induced hepatocellular carcinoma model Journal of Cancer Research and Therapeutics Sandhya Hora, Mohammad Asad, Swatantra Kumar Jain, Deepshikha Pande Katare
2021	Transcriptomic analysis of equine chorioallantois reveals immune networks and molecular mechanisms involved in nocardioform placentitis Veterinary Research Hossam El-Sheikh Ali, Shavahn C. Loux, Laura Kennedy, Kirsten E. Scoggin, Pouya Dini, Carleigh E. Fedorka, Theodore S. Kalbfleisch, Alejandro Esteller-Vico, David W. Horohov, Erdal Erol, Craig N. Carter, Jackie L. Smith, Barry A. Ball
2021	Transcriptional and Histochemical Signatures of Bone Marrow Mononuclear Cell-Mediated Resolution of Synovitis Frontiers in Immunology Bruno C. Menarim, Hossam El-Sheikh Ali, Shavahn C. Loux, Kirsten E. Scoggin, Theodore S. Kalbfleisch, James N. MacLeod, Linda A. Dahlgren
2021	Integrative analysis of lung molecular signatures reveals key drivers of idiopathic pulmonary fibrosis BMC Pulmonary Medicine Sung Kyoung Kim, Seung Min Jung, Kyung-Su Park, Ki-Jo Kim
2021	Systems biology and machine learning approaches identify drug targets in diabetic nephropathy Scientific Reports Maryam Abedi, Hamid Reza Marateb, Mohammad Reza Mohebian, Seyed Hamid Aghaee-Bakhtiari, Seyed Mahdi Nassiri, Yousof Gheisari
2021	Transcriptomic analysis of equine placenta reveals key regulators and pathways involved in ascending placentitis† Biology of Reproduction Hossam El-Sheikh Ali, Pouya Dini, Kirsten Scoggin, Shavahn Loux, Carleigh Fedorka, Yatta Boakari, Jamie Norris, Alejandro Esteller-Vico, Theodore Kalbfleisch, Barry Ball
2020	Reckoning the Dearth of Bioinformatics in the Arena of Diabetic Nephropathy (DN)—Need to Improvise Processes Jae-Wook Oh, Manikandan Muthu, Steve W. Haga, Vimala Anthonydhason, Piby Paul, Sechul Chun
2020	A systematic integrative approach reveals novel microRNAs in diabetic nephropathy Journal of Research in Medical Sciences Farnoush Kiyanpour, Maryam Abedi, Yousof Gheisari
2020	Impact of Cytokines and Phosphoproteins in Response to Chronic Joint Infection Biology Nicole Prince, Julia A. Penatzer, Matthew J. Dietz, Jonathan W. Boyd
2020	Transcriptomic analysis reveals the key regulators and molecular mechanisms underlying myometrial activation during equine placentitis† Biology of Reproduction H El-Sheikh Ali, Y L Boakari, S C Loux, P Dini, K E Scoggin, A Esteller-Vico, T Kalbfleisch, B A Ball
2020	Identification of Key Genes in Gastric Cancer by Bioinformatics Analysis BioMed Research International Xinyu Chong, Rui Peng, Yan Sun, Luyu Zhang, Zheng Zhang
2020	Proceedings of International Conference on Artificial Intelligence, Smart Grid and Smart City Applications D. Narmadha, A. Pravin, G. Naveen Sundar, Premnath Dhanaraj
2019	Construction and analysis of a diabetic nephropathy related protein-protein interaction network reveals nine critical and functionally associated genes Computational Biology and Chemistry Wenhao Jiang, Zheng Zhang, Yan Sun, Yajuan Zhang, Luyu Zhang, Handeng Liu, Rui Peng
2019	Equine arteritis virus long-term persistence is orchestrated by CD8+ T lymphocyte transcription factors, inhibitory receptors, and the CXCL16/CXCR6 axis PLOS Pathogens Mariano Carossino, Pouya Dini, Theodore S. Kalbfleisch, Alan T. Loynachan, Igor F. Canisso, R. Frank Cook, Peter J. Timoney, Udeni B. R. Balasuriya
2019	The analysis of a time-course transcriptome profile by systems biology approaches reveals key molecular processes in acute kidney injury Journal of Research in Medical Sciences Kobra Moradzadeh, Yousof Gheisari
2019	Analysis of Predicted Host–Parasite Interactomes Reveals Commonalities and Specificities Related to Parasitic Lifestyle and Tissues Tropism Frontiers in Immunology Yesid Cuesta-Astroz, Alberto Santos, Guilherme Oliveira, Lars J. Jensen
2018	The impact of cytokine responses in the intra- and extracellular signaling network of a traumatic injury Cytokine Alice A. Han, Holly N. Currie, Matthew S. Loos, Giovanni Scardoni, Julie V. Miller, Nicole Prince, Julia A. Mouch, Jonathan W. Boyd
2018	Network analysis of membranous glomerulonephritis based on metabolomics data Molecular Medicine Reports Amir Taherkhani, Shiva Kalantari, Afsaneh Arefi Oskouie, Mohsen Nafar, Mohammad Taghizadeh, Koorosh Tabar
2017	A GPU-based solution for fast calculation of the betweenness centrality in large weighted networks PeerJ Computer Science Rui Fan, Ke Xu, Jichang Zhao
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