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2023	Automatic block-wise genotype-phenotype association detection based on hidden Markov model BMC Bioinformatics Jin Du, Chaojie Wang, Lijun Wang, Shanjun Mao, Bencong Zhu, Zheng Li, Xiaodan Fan
2022	Characterization and In Vitro Testing of Newly Isolated Lytic Bacteriophages for the Biocontrol of Pseudomonas Aeruginosa Future Microbiology Liliam K Harada, Erica C Silva, Fernando PN Rossi, Basilio Cieza, Thais J Oliveira, Carla Pereira, Geizecler Tomazetto, Bianca B Silva, Fabio M Squina, Marta MDC Vila, João C Setubal, Taekjip Ha, Aline M da Silva, Victor M Balcão
2022	Pseudomonas -Tailed Lytic Phages: Genome Mechanical Analysis And Putative Correlation With Virion Morphogenesis Yield Future Microbiology Victor M Balcão, Aakash Basu, Basilio Cieza, Fernando N Rossi, Carla Pereira, Marta M D C Vila, João C Setubal, Taekjip Ha, Aline M da Silva
2021	On State Occupancies, First Passage Times and Duration in Non-Homogeneous Semi-Markov Chains Mathematics Andreas C. Georgiou, Alexandra Papadopoulou, Pavlos Kolias, Haris Palikrousis, Evanthia Farmakioti
2020	Laplacian score and genetic algorithm based automatic feature selection for Markov State Models in adaptive sampling based molecular dynamics PeerJ Physical Chemistry Anu George, Madhura Purnaprajna, Prashanth Athri
2020	Multi-AI competing and winning against humans in iterated Rock-Paper-Scissors game Scientific Reports Lei Wang, Wenbin Huang, Yuanpeng Li, Julian Evans, Sailing He
2019	Markov models—Markov chains Nature Methods Jasleen K. Grewal, Martin Krzywinski, Naomi Altman
2016	Quantitative Analysis of Axonal Branch Dynamics in the Developing Nervous System PLOS Computational Biology Kelsey Chalmers, Elizabeth M. Kita, Ethan K. Scott, Geoffrey J. Goodhill