Citation sources

Updated weekly. Details via Crossref
Crossref Scopus Google Scholar
48 36 Search
2025
Partial Treponema spp. as candidate probiotics for rumen methane mitigation revealed by a module-based activity index
Frontiers in Veterinary Science
2025
Microbial metagenomes from Lake Soyang, the largest freshwater reservoir in South Korea
Scientific Data
2025
Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
npj Biofilms and Microbiomes
2025
Impact of simulation and reference catalogues on the evaluation of taxonomic profiling pipelines
Microbial Genomics
2025
Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper
Nature Biotechnology
2025
Integrating network and in-silico simulation insights into the ecological interactions shaped by carbon sources in partial denitrification and anammox system
Water Research
2025
Microbiota-driven antitumour immunity mediated by dendritic cell migration
Nature
2025
Metagenomic insights of microbial functions under conventional and conservation agriculture
World Journal of Microbiology and Biotechnology
2025
Neoadjuvant cobimetinib and atezolizumab with or without vemurafenib for stage III melanoma: outcomes and the impact of the microbiome from the NeoACTIVATE trial
Journal for ImmunoTherapy of Cancer
2024
Personalized modeling of gut microbiome metabolism throughout the first year of life
Communications Medicine
2024
Interpretation of vaginal metagenomic characteristics in different types of vaginitis
mSystems
2024
The keystone gut species Christensenella minuta boosts gut microbial biomass and voluntary physical activity in mice
mBio
2024
Precision microbial intervention improves social behavior but not autism severity: A pilot double-blind randomized placebo-controlled trial
Cell Host & Microbe
2024
MetaBakery: a Singularity implementation of bioBakery tools as a skeleton application for efficient HPC deconvolution of microbiome metagenomic sequencing data to machine learning ready information
Frontiers in Microbiology
2024
Effects of antibiotic growth promoter and its natural alternative on poultry cecum ecosystem: an integrated analysis of gut microbiota and host expression
Frontiers in Microbiology
2024
MBCN: A novel reference database for Effcient Metagenomic analysis of human gut microbiome
Heliyon
2024
Temporal differentiation in the adaptation of functional bacteria to low-temperature stress in partial denitrification and anammox system
Environmental Research
2024
Genomic representativeness and chimerism in large collections of SAGs and MAGs of marine prokaryoplankton
Microbiome
2024
MCSS: microbial community simulator based on structure
Frontiers in Microbiology
2024
Microbial composition and metabolic profiles during machine-controlled intra-factory fermentation of cocoa beans harvested in semitropical area of Japan
Bioscience of Microbiota, Food and Health
2024
Unveiling the microbial realm with VEBA 2.0: a modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic and viral multi-omics from either short- or long-read sequencing
Nucleic Acids Research
2024
Prevention and cure of murine C. difficile infection by a Lachnospiraceae strain
Gut Microbes
2024
Spatial analysis of murine microbiota and bile acid metabolism during amoxicillin treatment
Cell Reports
2024
Exploring microbial diversity and biosynthetic potential in zoo and wildlife animal microbiomes
Nature Communications
2024
Effects of combined ciprofloxacin and Neulasta therapy on intestinal pathology and gut microbiota after high-dose irradiation in mice
Frontiers in Public Health
2024
Ferroptosis, Inflammation, and Microbiome Alterations in the Intestine in the Göttingen Minipig Model of Hematopoietic-Acute Radiation Syndrome
International Journal of Molecular Sciences
2023
Metagenomic data from surface seawater of the east coast of South Korea
Scientific Data
2023
The Western Lake Erie culture collection: A promising resource for evaluating the physiological and genetic diversity of Microcystis and its associated microbiome
Harmful Algae
2023
Metagenomic and Meta-Transcriptomic Analysis Reveal the Colonization and Expression Profile of Probiotic Strains in Humans and Animals
Fermentation
2023
The edible plant microbiome: evidence for the occurrence of fruit and vegetable bacteria in the human gut
Gut Microbes
2023
Metagenome-assembled genome extraction and analysis from microbiomes using KBase
Nature Protocols
2023
ResMiCo: Increasing the quality of metagenome-assembled genomes with deep learning
PLOS Computational Biology
2023
Complet+: a computationally scalable method to improve completeness of large-scale protein sequence clustering
PeerJ
2023
Short-Term Dietary Intervention with Whole Oats Protects from Antibiotic-Induced Dysbiosis
Microbiology Spectrum
2023
Metagenomic Analysis of a Concrete Bridge Reveals a Microbial Community Dominated by Halophilic Bacteria and Archaea
Microbiology Spectrum
2022
Incorporating genome‐based phylogeny and functional similarity into diversity assessments helps to resolve a global collection of human gut metagenomes
Environmental Microbiology
2022
Weaning Time Affects the Archaeal Community Structure and Functional Potential in Pigs
Frontiers in Microbiology
2022
Exploring strain diversity of dominant human skin bacterial species using single-cell genome sequencing
Frontiers in Microbiology
2022
Archaea: An under-estimated kingdom in livestock animals
Frontiers in Veterinary Science
Additional cited-by details will be shown when available from Crossref