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2024	Community‐scale models of microbiomes: Articulating metabolic modelling and metagenome sequencing Microbial Biotechnology Klara Cerk, Pablo Ugalde‐Salas, Chabname Ghassemi Nedjad, Maxime Lecomte, Coralie Muller, David J. Sherman, Falk Hildebrand, Simon Labarthe, Clémence Frioux
2023	Inferring and comparing metabolism across heterogeneous sets of annotated genomes using AuCoMe Genome Research Arnaud Belcour, Jeanne Got, Méziane Aite, Ludovic Delage, Jonas Collén, Clémence Frioux, Catherine Leblanc, Simon M. Dittami, Samuel Blanquart, Gabriel V. Markov, Anne Siegel
2023	Maintaining beneficial alga-associated bacterial communities under heat stress: insights from controlled co-culture experiments using antibiotic-resistant bacterial strains FEMS Microbiology Ecology Elham Karimi, Simon M Dittami
2022	Analysis of the Propionate Metabolism in Bacillus subtilis during 3-Indolacetic Production Microorganisms Freddy Castillo-Alfonso, Alejandro Quintana-Menéndez, Gabriel Vigueras-Ramírez, Alfonso Sales-Cruz, Luis Rosales-Colunga, Roberto Olivares-Hernández
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