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2024
Simple, reference-independent assessment to empirically guide correction and polishing of hybrid microbial community metagenomic assembly
PeerJ
2024
Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
Environmental Microbiology
2024
Die Grenzen der Bioinformatik in der Erforschung von archaeellen Viren
BIOspektrum
2024
Viral potential to modulate microbial methane metabolism varies by habitat
Nature Communications
2024
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans
Microbiome
2024
Nanopore and Illumina sequencing reveal different viral populations from human gut samples
Microbial Genomics
2024
The long and short of it: benchmarking viromics using Illumina, Nanopore and PacBio sequencing technologies
Microbial Genomics
2024
Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profiles
The ISME Journal
2024
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts
Nature Microbiology
2024
Long-read powered viral metagenomics in the oligotrophic Sargasso Sea
Nature Communications
2023
Virus impacted community adaptation in oligotrophic groundwater environment revealed by Hi-C coupled metagenomic and viromic study
Journal of Hazardous Materials
2023
Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines
Microbiome
2023
Viral Diversity in Benthic Abyssal Ecosystems: Ecological and Methodological Considerations
Viruses
2023
Benchmarking of virome metagenomic analysis approaches using a large, 60+ members, viral synthetic community
Journal of Virology
2022
Computational Tools for the Analysis of Uncultivated Phage Genomes
Microbiology and Molecular Biology Reviews
2022
Improved Mobilome Delineation in Fragmented Genomes
Frontiers in Bioinformatics
2022
Predators of Soil Bacteria in Plant and Human Health
Phytobiomes Journal
2022
Diversity in the soil virosphere: to infinity and beyond?
Trends in Microbiology
2022
Mutualistic interplay between bacteriophages and bacteria in the human gut
Nature Reviews Microbiology
2022
The Microbiomes of Humans, Animals, Plants, and the Environment
2022
Advances in Experimental Medicine and Biology
2022
Evolutionary Divergence of Marinobacter Strains in Cryopeg Brines as Revealed by Pangenomics
Frontiers in Microbiology
2022
viralFlye: assembling viruses and identifying their hosts from long-read metagenomics data
Genome Biology
2021
Analyzing Modern Biomolecules: The Revolution of Nucleic-Acid Sequencing – Review
Biomolecules
2021
Integrating Viral Metagenomics into an Ecological Framework
Annual Review of Virology
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