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2025
A Practical Comparison of Short‐ and Long‐Read Metabarcoding Sequencing: Challenges and Solutions for Plastid Read Removal and Microbial Community Exploration of Seaweed Samples
Molecular Ecology Resources
2025
Comparative metagenomic analysis of the oral microbiome in COVID-19 patients and healthy individuals
Scientific Reports
2025
A Tear-Based Approach for Rapid Identification of Bacterial Pathogens in Corneal Ulcers Using Nanopore Sequencing
Translational Vision Science & Technology
2025
From air to insight: the evolution of airborne DNA sequencing technologies
Microbiology
2025
Current Practices in Ophthalmology
2024
Clinical features, risk factors and outcomes of contact lens-related bacterial keratitis in Nottingham, UK: a 7-year study
Eye
2024
Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection
Scientific Reports
2024
EnsembleSeq: a workflow towards real-time, rapid, and simultaneous multi-kingdom-amplicon sequencing for holistic and resource-effective microbiome research at scale
Microbiology Spectrum
2024
Rapid Pathogen Detection in Infectious Uveitis Using Nanopore Metagenomic Next-Generation Sequencing: A Preliminary Study
Ocular Immunology and Inflammation
2024
Microbiological culture versus 16S/18S rRNA gene PCR-sanger sequencing for infectious keratitis: a three-arm, diagnostic cross-sectional study
Frontiers in Medicine
2024
Characterization of the upper respiratory tract microbiome of patients with acute respiratory infections by 16S rRNA sequencing
The Scientific Notes of the Pavlov University
2024
A comparison between full-length 16S rRNA Oxford nanopore sequencing and Illumina V3-V4 16S rRNA sequencing in head and neck cancer tissues
Archives of Microbiology
2024
Oxford Nanopore Technology-Based Identification of an Acanthamoeba castellanii Endosymbiosis in Microbial Keratitis
Microorganisms
2023
Diagnosis of Acanthamoeba Keratitis: Past, Present and Future
Diagnostics
2023
Nanopore Is Preferable over Illumina for 16S Amplicon Sequencing of the Gut Microbiota When Species-Level Taxonomic Classification, Accurate Estimation of Richness, or Focus on Rare Taxa Is Required
Microorganisms
2023
Microbiological work up in infective keratitis—The microbiologist’s view
Journal of Cornea and Ocular Surface
2023
FluoroPi Device With SmartProbes: A Frugal Point-of-Care System for Fluorescent Detection of Bacteria From a Pre-Clinical Model of Microbial Keratitis
Translational Vision Science & Technology
2023
Metagenomic next-generation sequencing to investigate infectious keratitis by Corynespora cassiicola: a case report
Frontiers in Medicine
2023
Quantitative risk assessment for bacterial community in residential kitchens
Building and Environment
2023
Shotgun metagenomic sequencing in culture negative microbial keratitis
European Journal of Ophthalmology
2022
Occupants contribute to pathogens and probiotics in indoor environments
Building and Environment
2022
16S rRNA nanopore sequencing for the diagnosis of ocular infection: a feasibility study
BMJ Open Ophthalmology
2022
Application Progress of High-Throughput Sequencing in Ocular Diseases
Journal of Clinical Medicine
2022
Nanopore Electrochemistry for Pathogen Detection
Chemistry – An Asian Journal
2022
Bacterial keratitis: identifying the areas of clinical uncertainty
Progress in Retinal and Eye Research
2022
Deep Metagenomic Sequencing for Endophthalmitis Pathogen Detection Using a Nanopore Platform
American Journal of Ophthalmology
2021
Infectious Eye Diseases - Recent Advances in Diagnosis and Treatment
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