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2025
Benthic Feeding and Diet Partitioning in Red Sea Mesopelagic Fish Resolved Through DNA Metabarcoding and ROV Footage
Ecology and Evolution
2025
Temporal Dynamics and Disturbance Responses in Coral‐Dwelling Decapods Provide a Novel Perspective on Their Ecological Role in Coral Reef Systems
Ecology and Evolution
2025
Crustaceans as Key Prey: Insights Into the Dietary Partitioning of Four Carnivorous Fishes in the Nansha Islands, South China Sea
Ecology and Evolution
2025
Taxon‐specific BLAST percent identity thresholds for identification of unknown sequences using metabarcoding
Methods in Ecology and Evolution
2025
A seascape dichotomy in the role of small consumers for coral reef energy fluxes
Ecology
2024
Dining on corals: stable isotope evidence for close trophic connection between gall crabs (Cryptochiridae) and their stony coral hosts
Symbiosis
2024
Size distribution of macroinvertebrate communities associated with live and dead coral
Marine Biology
2024
Settlement patterns and temporal successions of coral reef cryptic communities affect diversity assessments using autonomous reef monitoring structures (ARMS)
Scientific Reports
2024
Unlocking the jar: revealing gastric content in Ceriantharia (Cnidaria, Anthozoa) through whole-genome shotgun sequencing
Aquatic Ecology
2024
Dietary metabarcoding of keystone sardine species reveals the importance of their ichthyoplankton prey in food webs of the Southern Brazilian Bight fisheries
Fisheries Oceanography
2024
Application of Next-Generation Sequencing Technology in Southeast Asia: A Practical Framework for Advancing Wildlife Conservation
BIO Web of Conferences
2024
Despite plasticity, heatwaves are costly for a coral reef fish
Scientific Reports
2024
Dietary partitioning among three cryptobenthic reef fish mesopredators revealed by visual analysis, metabarcoding of gut content, and stable isotope analysis
Environmental DNA
2023
Pragmatic applications of DNA barcoding markers in identification of fish species – A review
Annals of Animal Science
2023
Gut content metabarcoding of specialized feeders is not a replacement for environmental DNA assays of seawater in reef environments
PeerJ
2023
Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring
Frontiers in Marine Science
2023
Habitat Use of Two Coral-Associated Cryptobenthic Gobiid Fishes (Family: Gobiidae) in the Southern Caribbean
Fishes
2023
A multiple-methods approach to investigate dietary differences among nominally herbivorous fishes
Marine Biology
2023
Age and Feeding Habits of Caml Grenadier Macrourus caml in Cosmonauts Sea
Fishes
2023
Metabarcoding: una herramienta prometedora para el estudio de la ecología trófica de peces mexicanos
Revista Mexicana de Biodiversidad
2023
A core of functional complementary bacteria infects oysters in Pacific Oyster Mortality Syndrome
Animal Microbiome
2023
Trophic level and proteobacteria abundance drive antibiotic resistance levels in fish from coastal New England
Animal Microbiome
2022
Taxonomic Diversity of Decapod and Stomatopod Crustaceans Associated with Pocilloporid Corals in the Central Mexican Pacific
Diversity
2022
Quantifying the diet diversity of herbivorous coral reef fishes using systematic review and DNA metabarcoding
Environmental DNA
2022
DNA metabarcoding provides insights into the diverse diet of a dominant suspension feeder, the giant plumose anemone Metridium farcimen
Environmental DNA
2022
Plant–animal interactions in the era of environmental DNA (eDNA)—A review
Environmental DNA
2022
Differences of Macroalgal Consumption by Eight Herbivorous Coral Reef Fishes From the Xisha Islands, China
Frontiers in Marine Science
2022
Comparison of the diets of the parrotfishes Scarus ovifrons and Calotomus japonicus using rDNA metabarcoding
Fisheries Science
2022
Advances in Phytoplankton Ecology
2022
Effectiveness of blocking primers and a peptide nucleic acid (PNA) clamp for 18S metabarcoding dietary analysis of herbivorous fish
PLOS ONE
2021
Limosilactobacillus fermentum JL-3 isolated from “Jiangshui” ameliorates hyperuricemia by degrading uric acid
Gut Microbes
2021
Sifting environmental DNA metabarcoding data sets for rapid reconstruction of marine food webs
Fish and Fisheries
2021
Advances and Limitations of Next Generation Sequencing in Animal Diet Analysis
Genes
2021
DNA metabarcoding for dietary analysis of Holland's carp (Spinibarbus hollandi) to evaluate the threat to native fishes in Taiwan
Journal of Fish Biology
2021
Food for everyone: Differential feeding habits of cryptic bat species inferred from DNA metabarcoding
Molecular Ecology
2021
Regional Comparison of Snow Leopard (Panthera uncia) Diet using DNA Metabarcoding
Biodiversity and Conservation
2021
Limited detection of secondarily consumed plant food by DNA‐based diet analysis of omnivorous carabid beetles
Environmental DNA
2021
Is Metagenomic Analysis an Effective Way to Analyze Fish Feeding Habits? A Case of the Yellowfin Sea Bream Acanthopagrus latus (Houttuyn) in Daya Bay
Frontiers in Marine Science
2021
Estimates of sponge consumption rates on an Indo-Pacific reef
Marine Ecology Progress Series
2021
Secondary predation constrains DNA-based diet reconstruction in two threatened shark species
Scientific Reports
2021
Fish as predators and prey: DNA‐based assessment of their role in food webs
Journal of Fish Biology
2020
Methods for Trophic Ecology Assessment in Fishes: A Critical Review of Stomach Analyses
Reviews in Fisheries Science & Aquaculture
2020
Discerning the dietary habits of the smooth butterfly ray Gymnura lessae using two distinct methods, otolith identification and metagenetics
Journal of Fish Biology
2020
Idea paper: Elucidation of the long‐term properties of food webs based on the intraspecific genetic diversity of hub species populations
Ecological Research
2020
Dual-locus DNA metabarcoding reveals southern hairy-nosed wombats (Lasiorhinus latifrons Owen) have a summer diet dominated by toxic invasive plants
PLOS ONE
2020
Decoding diversity in a coral reef fish species complex with restricted range using metagenomic sequencing of gut contents
Ecology and Evolution
2020
Metabarcoding demonstrates dietary niche partitioning in two coexisting blackfish species
Marine and Freshwater Research
2020
Advances in metabarcoding techniques bring us closer to reliable monitoring of the marine benthos
Journal of Applied Ecology
2020
Metabarcoding of native and invasive species in stomach contents of Great Lakes fishes
PLOS ONE
2020
Diet of the coral hawkfish Cirrhitichthys oxycephalus (Family: Cirrhitidae) in a fringing coral reef of the Eastern Tropical Pacific
Coral Reefs
2020
Dietary and habitat niche partitioning in congeneric cryptobenthic reef fish species
Coral Reefs
2020
New 12S metabarcoding primers for enhanced Neotropical freshwater fish biodiversity assessment
Scientific Reports
2019
18S rRNA metabarcoding diet analysis of a predatory fish community across seasonal changes in prey availability
Ecology and Evolution
2019
A DNA barcode reference library of French Polynesian shore fishes
Scientific Data
2019
Categorization of species as native or nonnative using DNA sequence signatures without a complete reference library
Ecological Applications
2019
Promises and pitfalls of using high‐throughput sequencing for diet analysis
Molecular Ecology Resources
2019
Dietary partitioning promotes the coexistence of planktivorous species on coral reefs
Molecular Ecology
2019
DNA metabarcoding unveils multiscale trophic variation in a widespread coastal opportunist
Molecular Ecology
2019
Utilizing DNA metabarcoding to characterize the diet of marine-phase Arctic lamprey (Lethenteron camtschaticum) in the eastern Bering Sea
Canadian Journal of Fisheries and Aquatic Sciences
2019
How does marker choice affect your diet analysis: comparing genetic markers and digestion levels for diet metabarcoding of tropical-reef piscivores
Marine and Freshwater Research
2019
High-resolution molecular identification of smalltooth sawfish prey
Scientific Reports
2019
The menu varies with metabarcoding practices: A case study with the bat Plecotus auritus
PLOS ONE
2019
Reconstructing hyperdiverse food webs: Gut content metabarcoding as a tool to disentangle trophic interactions on coral reefs
Methods in Ecology and Evolution
2019
World Seas: An Environmental Evaluation
2019
DNA metabarcoding in diet studies: Unveiling ecological aspects in aquatic and terrestrial ecosystems
Environmental DNA
2019
Ecology of Prognathodes obliquus, a butterflyfish endemic to mesophotic ecosystems of St. Peter and St. Paul’s Archipelago
Coral Reefs
2019
ILTER – The International Long-Term Ecological Research Network as a Platform for Global Coastal and Ocean Observation
Frontiers in Marine Science
2018
A metabarcoding approach for the feeding habits of European hake in the Adriatic Sea
Ecology and Evolution
2018
Variation in coral-associated cryptofaunal communities across spatial scales and environmental gradients
Coral Reefs
2018
Integrating complementary methods to improve diet analysis in fishery‐targeted species
Ecology and Evolution
2018
Comparing three types of dietary samples for prey DNA decay in an insect generalist predator
Molecular Ecology Resources
2018
Unexpected prey of juvenile spotted scat (Scatophagus argus) near a wharf: The prevalence of fouling organisms in stomach contents
Ecology and Evolution
2017
A Review of the Tools Used for Marine Monitoring in the UK: Combining Historic and Contemporary Methods with Modeling and Socioeconomics to Fulfill Legislative Needs and Scientific Ambitions
Frontiers in Marine Science
2017
Metabarcoding analysis of the stomach contents of the Antarctic Toothfish (Dissostichus mawsoni) collected in the Antarctic Ocean
PeerJ
2017
Harbour seals target juvenile salmon of conservation concern
Canadian Journal of Fisheries and Aquatic Sciences
2017
Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding
PeerJ
2017
Patterns of temporal and enemy niche use by a community of leaf cone moths (Caloptilia) coexisting on maples (Acer) as revealed by metabarcoding
Molecular Ecology
2017
Advances in Ecological Research
2017
Gutsy genetics: identification of digested piscine prey items in the stomach contents of sympatric native and introduced warmwater catfishes via DNA barcoding
Environmental Biology of Fishes
2016
Methods in Molecular Biology
2016
Australian Tropical Marine Micromolluscs: An Overwhelming Bias
Diversity
2016
Censusing marine eukaryotic diversity in the twenty-first century
Philosophical Transactions of the Royal Society B: Biological Sciences
2016
Metabarcoding of marine nematodes – evaluation of reference datasets used in tree-based taxonomy assignment approach
Biodiversity Data Journal
2016
Three decades of recurrent declines and recoveries in corals belie ongoing change in fish assemblages
Coral Reefs
2016
Assembling and auditing a comprehensive DNA barcode reference library for European marine fishes
Journal of Fish Biology
2016
The use of DNA barcodes in food web construction—terrestrial and aquatic ecologists unite!
Genome
2016
Temporal and spatial trends in prey composition of wahooAcanthocybium solandri: a diet analysis from the central North Pacific Ocean using visual andDNAbar‐coding techniques
Journal of Fish Biology
2016
Molecular trophic markers in marine food webs and their potential use for coral ecology
Marine Genomics
2016
Use of DNA metabarcoding for stomach content analysis in the invasive lionfish Pterois volitans in Puerto Rico
Marine Ecology Progress Series
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