Sandeep J Joseph

Summary

Bioinformatics Evolutionary Studies Genomics Infectious Diseases Microbiology

Past or current institution affiliations

Emory University

Websites

Google Scholar

PeerJ Contributions

Articles 3
Preprints 3

August 22, 2018

Fine-scale differentiation between Bacillus anthracis and Bacillus cereus group signatures in metagenome shotgun data

2 citations

299 downloads

1,359 views

Robert A. Petit III, James M. Hogan, Matthew N. Ezewudo, Sandeep J. Joseph, Timothy D. Read

https://doi.org/10.7717/peerj.5515 PubMed 30155371

October 18, 2016

The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data

4 citations

683 downloads

3,287 views

Sandeep J. Joseph, Ben Li, Robert A. Petit III, Zhaohui S. Qin, Lyndsey Darrow, Timothy D. Read

https://doi.org/10.7717/peerj.2571 PubMed 27781166

March 5, 2015

Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance

40 citations

1,546 downloads

5,617 views

Matthew N. Ezewudo, Sandeep J. Joseph, Santiago Castillo-Ramirez, Deborah Dean, Carlos del Rio, Xavier Didelot, Jo-Anne Dillon, Richard F. Selden, William M. Shafer, Rosemary S. Turingan, Magnus Unemo, Timothy D. Read

https://doi.org/10.7717/peerj.806 PubMed 25780762

September 30, 2016 - Version: 1

Tet(C) gene transfer between Chlamydia suis strains occurs by homologous recombination after co-infection: Implications for spread of tetracycline-resistance among Chlamydiaceae

325 downloads

876 views

Hanna Marti, Hoyon Kim, Sandeep Joseph, Stacey S Dojiri, Timothy Read, Deborah Dean

https://doi.org/10.7287/peerj.preprints.2489v1

February 14, 2015 - Version: 1

Draft sequencing and assembly of the genome of the world’s largest fish, the whale shark: Rhincodon typus Smith 1828

1,839 downloads

4,970 views

Timothy D Read, Robert A Petit III, Sandeep J Joseph, Md T Alam, Ryan Weil, Maida Ahmad, Ravila Bhimani, Jocelyn S Vuong, Chad P Haase, Harry Webb, Alistair D. M. Dove

https://doi.org/10.7287/peerj.preprints.837v1

November 26, 2014 - Version: 1

Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance

494 downloads

1,074 views

Matthew N. Ezewudo, Sandeep Joseph, Santiago Castillo-Ramirez, Deborah Dean, Carlos Del Rio, Xavier Didelot, Jo-Anne R. Dillon, Richard F Selden, William M. Shafer, Rosemary S. Turingan, Magnus Unemo, Timothy D. Read

https://doi.org/10.7287/peerj.preprints.636v1