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Karel Berka
PeerJ Reviewer
105 Points

Contributions by role

Reviewer 105

Contributions by subject area

Biochemistry
Biophysics
Computational Biology
Molecular Biology
Bioinformatics
Computational Science
Data Mining and Machine Learning
Data Science

Karel Berka

PeerJ Reviewer

Summary

Research specialization
Protein stabilization and function, molecular dynamics of biomolecules and their complexes, biomolecular channel analysis, membrane protein simulations, docking, small molecule penetration through membranes, cytochrome P450 enzymes, drug metabolism, structural bioinformatics.

Education
2016 - Asoc.Prof. in Physical Chemistry, Palacky University in Olomouc
2010 - Ph.D. in Molecular Modeling, Charles University in Prague
2008 - RNDr. in Physical Chemistry, Charles University in Prague
2006 - Mgr. in Physical chemistry, Charles University in Prague

Biochemistry Bioinformatics Computational Biology Pharmacology Science & Medical Education

Editing Journals

Past or current institution affiliations

Palacký University Olomouc

Work details

Associate Professor

Palacký University Olomouc
September 2018
Physical chemistry, RCPTM

Assistant Professor

Palacky University
March 2010 - August 2018
Department of Physical Chemistry, RCPTM

Websites

  • Google Scholar
  • PubMed Search
  • ResearcherID

PeerJ Contributions

  • Reviewed 2
  • Questions 1

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

December 7, 2018
RIP-MD: a tool to study residue interaction networks in protein molecular dynamics
Sebastián Contreras-Riquelme, Jose-Antonio Garate, Tomas Perez-Acle, Alberto J.M. Martin
https://doi.org/10.7717/peerj.5998 PubMed 30568854
June 22, 2016
Simple approach for ranking structure determining residues
Oscar D. Luna-Martínez, Abraham Vidal-Limón, Miryam I. Villalba-Velázquez, Rosalba Sánchez-Alcalá, Ramón Garduño-Juárez, Vladimir N. Uversky, Baltazar Becerril
https://doi.org/10.7717/peerj.2136 PubMed 27366642

1 Question

0
Are there any preferred models for skin penetration?