Ben J Woodcroft

ORCID: 0000-0003-0670-7480

Summary

Biodiversity Bioinformatics Environmental Sciences Microbiology

PeerJ Contributions

September 22, 2016

Validation of picogram- and femtogram-input DNA libraries for microscale metagenomics

27 citations

1,119 downloads

5,344 views

Christian Rinke, Serene Low, Ben J. Woodcroft, Jean-Baptiste Raina, Adam Skarshewski, Xuyen H. Le, Margaret K. Butler, Roman Stocker, Justin Seymour, Gene W. Tyson, Philip Hugenholtz

https://doi.org/10.7717/peerj.2486 PubMed 27688978

May 21, 2015

Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus

54 citations

1,302 downloads

6,985 views

Rochelle M. Soo, Ben J. Woodcroft, Donovan H. Parks, Gene W. Tyson, Philip Hugenholtz

https://doi.org/10.7717/peerj.968 PubMed 26038723

September 30, 2014

GroopM: an automated tool for the recovery of population genomes from related metagenomes

150 citations

1,890 downloads

8,719 views

Michael Imelfort, Donovan Parks, Ben J. Woodcroft, Paul Dennis, Philip Hugenholtz, Gene W. Tyson

https://doi.org/10.7717/peerj.603 PubMed 25289188

June 10, 2014 - Version: 1

GroopM: An automated tool for the recovery of population genomes from related metagenomes

1,080 downloads

3,151 views

Michael Imelfort, Donovan Parks, Ben J Woodcroft, Paul Dennis, Philip Hugenholtz, Gene W Tyson

https://doi.org/10.7287/peerj.preprints.409v1

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

November 2, 2018

imGLAD: accurate detection and quantification of target organisms in metagenomes

7 citations

338 downloads

1,116 views

Juan C. Castro, Luis M. Rodriguez-R, William T. Harvey, Michael R. Weigand, Janet K. Hatt, Michelle Q. Carter, Konstantinos T. Konstantinidis

https://doi.org/10.7717/peerj.5882 PubMed 30405973

November 8, 2016

Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C)

7 citations

530 downloads

2,856 views

Matthew Z. DeMaere, Aaron E. Darling

https://doi.org/10.7717/peerj.2676 PubMed 27843713