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Abdoallah Sharaf
PeerJ Author
240 Points

Contributions by role

Author 100
Preprint Author 140

Contributions by subject area

Agricultural Science
Bioinformatics
Genomics
Virology
Computational Biology
Evolutionary Studies
Marine Biology
Parasitology
Environmental Contamination and Remediation
Microbiology

Abdoallah Sharaf

PeerJ Author

Summary

Presently, I'm an assistant professor of Genetic in the faculty of Agriculture, Ain Shams University and a research scientist in Biology Centre ASCR, Institute of Parasitology, Czech Republic. My current project focused on the investigation of an origin of the exosymbiont (secondary host), the symbiotic partner in the secondary endosymbioses leading to the evolution of algae such as for instance diatoms, haptophytes, cryptophytes, chromerida or even apicomplexan parasites such as Plasmodium or Toxoplasma. Also, I have other small projects in progress to study the induced microRNAs of Chromera velia under Cadmium stress and the transcriptome of Pyrrhocoris apterus Central Nervous System under nematode stress. i have strong experience in the shell script, Python and R programming moreover i’m able to do high-performance computing (HPC) for big data using cloud which allowed me to develop my own scripts and in-house pipelines. From my belief in the importance of bioinformatics, I keep developing my skills.

Biodiversity Bioinformatics Computational Biology Evolutionary Studies Genomics Virology

Editing Journals

Past or current institution affiliations

Ain Shams University

Work details

Research Scientist

Laboratory of Evolutionary Protistology Biology Centre ASCR, v.v.i.
Parasitology

Websites

  • LinkedIn
  • GitHub

PeerJ Contributions

  • Articles 1
  • Preprints 4
December 10, 2018
Characterization and comparative genomic analysis of virulent and temperate Bacillus megaterium bacteriophages
Abdoallah Sharaf, Miroslav Oborník, Adel Hammad, Sohair El-Afifi, Eman Marei
https://doi.org/10.7717/peerj.5687 PubMed 30581654
May 22, 2019 - Version: 1
Deep transcriptomic analysis of Chromera velia under Mercury-stress condition
Abdoallah Sharaf, Roberto De Michele, Ayush Sharma, Miroslav Oborník
https://doi.org/10.7287/peerj.preprints.27750v1
September 11, 2018 - Version: 1
Complete genome sequence of new virulent actinophages belonging to Streptomyces flavovirens
Abdoallah Sharaf, Francesco Mercati, Ibrahim Elmaghraby, Reham Elbaz, Eman Marei
https://doi.org/10.7287/peerj.preprints.27186v1
September 6, 2018 - Version: 1
Characterization and Comparative Genomics Analysis of two Bacillus megaterium lytic bacteriophages
Abdoallah Sharaf, Miroslav Obornik, Adel Hammad, Sohair El-Afifi, Eman Marei
https://doi.org/10.7287/peerj.preprints.27171v1
June 23, 2017 - Version: 1
The evolution of aminoacyl-tRNA synthetases in chromerids
Abdoallah Sharaf, Kateřina Jiroutová, Miroslav Obornik
https://doi.org/10.7287/peerj.preprints.3045v1